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    Uhrf1bp1l UHRF1 (ICBP90) binding protein 1-like [ Mus musculus (house mouse) ]

    Gene ID: 75089, updated on 23-Jun-2021

    Summary

    Official Symbol
    Uhrf1bp1lprovided by MGI
    Official Full Name
    UHRF1 (ICBP90) binding protein 1-likeprovided by MGI
    Primary source
    MGI:MGI:2442888
    See related
    Ensembl:ENSMUSG00000019951
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C80672; AA589495; mKIAA0701; 2010319N22Rik; 4930506D01Rik; E030041M21Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 7.5), frontal lobe adult (RPKM 6.5) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Uhrf1bp1l in Genome Data Viewer
    Location:
    10; 10 C2
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (89580830..89655753)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (89744968..89819891)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (89207736..89282614)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30963 Neighboring gene ARP6 actin-related protein 6 Neighboring gene predicted gene, 31090 Neighboring gene predicted gene, 26180 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 1B Neighboring gene protein transport protein Sec61 subunit gamma pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA0701

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables GARP complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in early endosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    UHRF1-binding protein 1-like
    Names
    syntaxin-6 Habc-interacting protein of 164 kDa

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029166.2NP_083442.2  UHRF1-binding protein 1-like

      See identical proteins and their annotated locations for NP_083442.2

      Status: VALIDATED

      Source sequence(s)
      AC130216, AK015715, AK046432, AK141050, BB529788, BM202084
      Consensus CDS
      CCDS36028.1
      UniProtKB/Swiss-Prot
      A2RSJ4
      UniProtKB/TrEMBL
      Q9D574
      Related
      ENSMUSP00000020112.6, ENSMUST00000020112.7
      Conserved Domains (1) summary
      pfam12624
      Location:387
      Chorein_N; N-terminal region of Chorein or VPS13

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      89580830..89655753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017314128.2XP_017169617.1  UHRF1-binding protein 1-like isoform X1

      Conserved Domains (1) summary
      pfam12624
      Location:396
      Chorein_N; N-terminal region of Chorein or VPS13
    2. XM_036156067.1XP_036011960.1  UHRF1-binding protein 1-like isoform X3

      Conserved Domains (1) summary
      pfam12624
      Location:587
      Chorein_N; N-terminal region of Chorein or VPS13
    3. XM_030245339.1XP_030101199.1  UHRF1-binding protein 1-like isoform X2

      Conserved Domains (1) summary
      pfam12624
      Location:139
      Chorein_N; N-terminal region of Chorein or VPS13
    4. XM_030245342.2XP_030101202.1  UHRF1-binding protein 1-like isoform X4

    5. XM_006514264.3XP_006514327.1  UHRF1-binding protein 1-like isoform X2

      Conserved Domains (1) summary
      pfam12624
      Location:139
      Chorein_N; N-terminal region of Chorein or VPS13
    6. XM_036156066.1XP_036011959.1  UHRF1-binding protein 1-like isoform X2

      Conserved Domains (1) summary
      pfam12624
      Location:139
      Chorein_N; N-terminal region of Chorein or VPS13
    7. XM_017314129.3XP_017169618.1  UHRF1-binding protein 1-like isoform X5

    RNA

    1. XR_380453.2 RNA Sequence

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