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    SEMA3A semaphorin 3A [ Pan troglodytes (chimpanzee) ]

    Gene ID: 745878, updated on 4-Jan-2019

    Summary

    Official Symbol
    SEMA3Aprovided by VGNC
    Official Full Name
    semaphorin 3Aprovided by VGNC
    Primary source
    VGNC:VGNC:8748
    Locus tag
    CK820_G0029065
    See related
    Ensembl:ENSPTRG00000019354
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See SEMA3A in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 7 NC_036886.1 (79992674..80524651, complement)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 7 NC_006474.4 (86790102..87323198, complement)

    Chromosome 7 - NC_036886.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107975856 Neighboring gene semaphorin 3E Neighboring gene UV excision repair protein RAD23 homolog B pseudogene Neighboring gene uncharacterized LOC100612467 Neighboring gene uncharacterized LOC107976086

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Axon guidance, organism-specific biosystem (from KEGG)
      Axon guidance, organism-specific biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, conserved biosystem (from KEGG)
      Axon guidance, conserved biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    semaphorin-3A
    Names
    sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036886.1 Reference Clint_PTRv2 Primary Assembly

      Range
      79992674..80524651 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009453467.3XP_009451742.2  semaphorin-3A isoform X1

      Related
      ENSPTRP00000079872.1
      Conserved Domains (3) summary
      cd05871
      Location:580670
      Ig_Semaphorin_classIII; Immunoglobulin (Ig)-like domain of class III semaphorin
      cd11249
      Location:26518
      Sema_3A; The Sema domain, a protein interacting module, of semaphorin 3A (Sema3A)
      smart00423
      Location:516552
      PSI; domain found in Plexins, Semaphorins and Integrins
    2. XM_016957659.2XP_016813148.1  semaphorin-3A isoform X1

      Related
      ENSPTRP00000087817.1
      Conserved Domains (3) summary
      cd05871
      Location:580670
      Ig_Semaphorin_classIII; Immunoglobulin (Ig)-like domain of class III semaphorin
      cd11249
      Location:26518
      Sema_3A; The Sema domain, a protein interacting module, of semaphorin 3A (Sema3A)
      smart00423
      Location:516552
      PSI; domain found in Plexins, Semaphorins and Integrins
    3. XM_009453470.3XP_009451745.2  semaphorin-3A isoform X1

      Related
      ENSPTRP00000033105.4
      Conserved Domains (3) summary
      cd05871
      Location:580670
      Ig_Semaphorin_classIII; Immunoglobulin (Ig)-like domain of class III semaphorin
      cd11249
      Location:26518
      Sema_3A; The Sema domain, a protein interacting module, of semaphorin 3A (Sema3A)
      smart00423
      Location:516552
      PSI; domain found in Plexins, Semaphorins and Integrins
    4. XM_009453471.3XP_009451746.2  semaphorin-3A isoform X2

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