Format

Send to:

Choose Destination
    • Showing Current items.

    Rbm26 RNA binding motif protein 26 [ Mus musculus (house mouse) ]

    Gene ID: 74213, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rbm26provided by MGI
    Official Full Name
    RNA binding motif protein 26provided by MGI
    Primary source
    MGI:MGI:1921463
    See related
    Ensembl:ENSMUSG00000022119
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pro1; C86225; Se70-2; MLZ-393; Pro1777; AI447318; 1700009P03Rik; C230097K14Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 9.9), limb E14.5 (RPKM 8.2) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rbm26 in Genome Data Viewer
    Location:
    14; 14 E2.3
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (105344187..105418475, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (105106751..105181039, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (105513736..105576544, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24280 Neighboring gene PRP38 pre-mRNA processing factor 38 domain containing A pseudogene Neighboring gene plastin 3 (T-isoform) pseudogene Neighboring gene predicted gene, 22290

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    RNA-binding protein 26
    Names
    cutaneous T-cell lymphoma tumor antigen se70-2
    protein expressed in male leptotene and zygotene spermatocytes 393

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001368683.1NP_001355612.1  RNA-binding protein 26 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC113125, AC146601
      Related
      ENSMUSP00000128197.2, ENSMUST00000163499.2
      Conserved Domains (6) summary
      smart00356
      Location:294314
      ZnF_C3H1; zinc finger
      cd12258
      Location:891962
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:536611
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      pfam08648
      Location:133165
      DUF1777; Protein of unknown function (DUF1777)
      pfam03962
      Location:726821
      Mnd1; Mnd1 family
      cl02562
      Location:1174
      PWI; PWI domain
    2. NM_001368684.1NP_001355613.1  RNA-binding protein 26 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC113125, AC146601
      Consensus CDS
      CCDS88725.1
      Related
      ENSMUSP00000022715.8, ENSMUST00000022715.14
      Conserved Domains (6) summary
      smart00356
      Location:294314
      ZnF_C3H1; zinc finger
      cd12258
      Location:886957
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:531606
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      pfam08648
      Location:133165
      DUF1777; Protein of unknown function (DUF1777)
      pfam03962
      Location:721816
      Mnd1; Mnd1 family
      cl02562
      Location:1174
      PWI; PWI domain
    3. NM_001368685.1NP_001355614.1  RNA-binding protein 26 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC113125, AC146601
      Conserved Domains (6) summary
      smart00356
      Location:294314
      ZnF_C3H1; zinc finger
      cd12258
      Location:896967
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:541616
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      pfam08648
      Location:133165
      DUF1777; Protein of unknown function (DUF1777)
      pfam03962
      Location:731826
      Mnd1; Mnd1 family
      cl02562
      Location:1174
      PWI; PWI domain
    4. NM_134077.5NP_598838.3  RNA-binding protein 26 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC113125, AC146601
      Consensus CDS
      CCDS37003.1
      UniProtKB/Swiss-Prot
      Q6NZN0
      UniProtKB/TrEMBL
      E9PUF4
      Related
      ENSMUSP00000097901.4, ENSMUST00000100327.10
      Conserved Domains (6) summary
      smart00356
      Location:294314
      ZnF_C3H1; zinc finger
      cd12258
      Location:862933
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:531606
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      pfam08648
      Location:132165
      DUF1777; Protein of unknown function (DUF1777)
      pfam13864
      Location:714795
      Enkurin; Calmodulin-binding
      cl02562
      Location:1176
      PWI; PWI domain

    RNA

    1. NR_166779.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC113125, AC146601

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      105344187..105418475 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036158877.1XP_036014770.1  RNA-binding protein 26 isoform X16

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:8961017
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10621133
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:734809
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    2. XM_036158871.1XP_036014764.1  RNA-binding protein 26 isoform X8

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9201041
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10861157
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:734809
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    3. XM_036158876.1XP_036014769.1  RNA-binding protein 26 isoform X15

      Conserved Domains (6) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:8991020
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10651136
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:734809
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
      cl41773
      Location:811906
      SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
    4. XM_030248075.1XP_030103935.1  RNA-binding protein 26 isoform X14

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:10891160
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:734809
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9231044
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    5. XM_030248069.1XP_030103929.1  RNA-binding protein 26 isoform X7

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:10891160
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:734809
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9231044
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    6. XM_036158870.1XP_036014763.1  RNA-binding protein 26 isoform X6

      Related
      ENSMUSP00000126414.2, ENSMUST00000163545.8
      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9251046
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10911162
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:739814
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    7. XM_036158869.1XP_036014762.1  RNA-binding protein 26 isoform X5

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9281049
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10941165
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:739814
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    8. XM_036158868.1XP_036014761.1  RNA-binding protein 26 isoform X4

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9301051
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10961167
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:744819
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    9. XM_036158875.1XP_036014768.1  RNA-binding protein 26 isoform X13

      Conserved Domains (6) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9091030
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10751146
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:744819
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
      cl41773
      Location:821916
      SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
    10. XM_036158867.1XP_036014760.1  RNA-binding protein 26 isoform X3

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9331054
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10991170
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:744819
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    11. XM_036158874.1XP_036014767.1  RNA-binding protein 26 isoform X12

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9351056
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:11011172
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    12. XM_036158866.1XP_036014759.1  RNA-binding protein 26 isoform X2

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9351056
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:11011172
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
    13. XM_036158873.1XP_036014766.1  RNA-binding protein 26 isoform X11

      Conserved Domains (6) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9141035
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10801151
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
      cl41773
      Location:826921
      SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
    14. XM_036158872.1XP_036014765.1  RNA-binding protein 26 isoform X11

      Conserved Domains (6) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      TIGR04523
      Location:9141035
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cd12258
      Location:10801151
      RRM2_RBM26_like; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain
      cl41773
      Location:826921
      SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
    15. XM_030248072.1XP_030103932.1  RNA-binding protein 26 isoform X10

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:11041175
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9381059
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    16. XM_030248071.1XP_030103931.1  RNA-binding protein 26 isoform X9

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:11041175
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9381059
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    17. XM_030248061.1XP_030103921.1  RNA-binding protein 26 isoform X1

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:11041175
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9381059
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    18. XM_030248062.1XP_030103922.1  RNA-binding protein 26 isoform X1

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:11041175
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9381059
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    19. XM_030248058.1XP_030103918.1  RNA-binding protein 26 isoform X1

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:11041175
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9381059
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    20. XM_030248060.1XP_030103920.1  RNA-binding protein 26 isoform X1

      Conserved Domains (5) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12258
      Location:11041175
      RRM2_RBM26_like; RNA recognition motif 2 of vertebrate RNA-binding protein 26 (RBM26) and similar proteins
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 of vertebrate RNA-binding protein 26 (RBM26)
      TIGR04523
      Location:9381059
      Mplasa_alph_rch; helix-rich Mycoplasma protein
      cl02562
      Location:214277
      PWI; PWI domain
    21. XM_036158878.1XP_036014771.1  RNA-binding protein 26 isoform X17

      Conserved Domains (3) summary
      smart00356
      Location:497517
      ZnF_C3H1; zinc finger
      cd12516
      Location:749824
      RRM1_RBM26; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26)
      cl02562
      Location:214279
      PWI; PWI domain

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_040628.1: Suppressed sequence

      Description
      NR_040628.1: This RefSeq was removed because the gene was discontinued.
    Support Center