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    Pop7 processing of precursor 7, ribonuclease P family, (S. cerevisiae) [ Mus musculus (house mouse) ]

    Gene ID: 74097, updated on 9-Sep-2018

    Summary

    Official Symbol
    Pop7provided by MGI
    Official Full Name
    processing of precursor 7, ribonuclease P family, (S. cerevisiae)provided by MGI
    Primary source
    MGI:MGI:1921347
    See related
    Ensembl:ENSMUSG00000029715 Vega:OTTMUSG00000021945
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rpp20; AI852017; 0610037N12Rik
    Expression
    Ubiquitous expression in ovary adult (RPKM 22.5), large intestine adult (RPKM 22.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Pop7 in Genome Data Viewer
    Location:
    5; 5 G2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (137501439..137502429, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (137942667..137943657, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 38725 Neighboring gene predicted gene, 36056 Neighboring gene erythropoietin Neighboring gene GRB10 interacting GYF protein 1 Neighboring gene microRNA 6418 Neighboring gene guanine nucleotide binding protein (G protein), beta 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    • RNA transport, organism-specific biosystem (from KEGG)
      RNA transport, organism-specific biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
    • RNA transport, conserved biosystem (from KEGG)
      RNA transport, conserved biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
    • Ribosome biogenesis in eukaryotes, organism-specific biosystem (from KEGG)
      Ribosome biogenesis in eukaryotes, organism-specific biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
    • Ribosome biogenesis in eukaryotes, conserved biosystem (from KEGG)
      Ribosome biogenesis in eukaryotes, conserved biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to ribonuclease P activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    contributes_to ribonuclease P activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    tRNA 5'-leader removal ISO
    Inferred from Sequence Orthology
    more info
     
    tRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    multimeric ribonuclease P complex ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ribonuclease MRP complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ribonuclease P protein subunit p20
    Names
    Pop7 homolog
    RNaseP protein p20
    NP_083029.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028753.2NP_083029.1  ribonuclease P protein subunit p20

      See identical proteins and their annotated locations for NP_083029.1

      Status: PROVISIONAL

      Source sequence(s)
      AK002782
      Consensus CDS
      CCDS19768.1
      UniProtKB/Swiss-Prot
      Q9DCH2
      Related
      ENSMUSP00000031728.4, OTTMUSP00000024627, ENSMUST00000031728.4, OTTMUST00000052087
      Conserved Domains (1) summary
      pfam12328
      Location:33133
      Rpp20; Rpp20 subunit of nuclear RNase MRP and P

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      137501439..137502429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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