Format

Send to:

Choose Destination
    • Showing Current items.

    Ppp1r21 protein phosphatase 1, regulatory subunit 21 [ Mus musculus (house mouse) ]

    Gene ID: 73825, updated on 5-Aug-2018

    Summary

    Official Symbol
    Ppp1r21provided by MGI
    Official Full Name
    protein phosphatase 1, regulatory subunit 21provided by MGI
    Primary source
    MGI:MGI:1921075
    See related
    Ensembl:ENSMUSG00000034709 Vega:OTTMUSG00000048547
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Klraq1; Ccdc128; AI426045; AW550781; 1110018J12Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 11.8), cerebellum adult (RPKM 10.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Ppp1r21 in Genome Data Viewer
    Location:
    17; 17 E4
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (88530124..88588367)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (88929464..88987707)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 31615 Neighboring gene RIKEN cDNA 1700116H05 gene Neighboring gene predicted gene, 41651 Neighboring gene forkhead box N2 Neighboring gene ubiquitin-conjugating enzyme E2 S-like Neighboring gene stonin 1 Neighboring gene predicted gene, 31704

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC117934

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein phosphatase 1 regulatory subunit 21
    Names
    KLRAQ motif containing 1
    KLRAQ motif-containing protein 1
    coiled-coil domain containing 128
    coiled-coil domain-containing protein 128

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028658.4NP_082934.3  protein phosphatase 1 regulatory subunit 21

      See identical proteins and their annotated locations for NP_082934.3

      Status: VALIDATED

      Source sequence(s)
      BC137673, BQ176826, BY205567
      Consensus CDS
      CCDS29023.1
      UniProtKB/Swiss-Prot
      Q3TDD9
      Related
      ENSMUSP00000048443.6, OTTMUSP00000067694, ENSMUST00000038551.7, OTTMUST00000124396
      Conserved Domains (2) summary
      pfam10205
      Location:11111
      KLRAQ; Predicted coiled-coil domain-containing protein
      pfam10212
      Location:255771
      TTKRSYEDQ; Predicted coiled-coil domain-containing protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      88530124..88588367
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017317677.1XP_017173166.1  protein phosphatase 1 regulatory subunit 21 isoform X1

    Support Center