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    Bbln bublin coiled coil protein [ Mus musculus (house mouse) ]

    Gene ID: 73737, updated on 18-Sep-2024

    Summary

    Official Symbol
    Bblnprovided by MGI
    Official Full Name
    bublin coiled coil proteinprovided by MGI
    Primary source
    MGI:MGI:1920987
    See related
    Ensembl:ENSMUSG00000039195 AllianceGenome:MGI:1920987
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110008P14Rik
    Summary
    Is expressed in nervous system. Orthologous to human BBLN (bublin coiled coil protein). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in adrenal adult (RPKM 385.5), cortex adult (RPKM 183.4) and 23 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Bbln in Genome Data Viewer
    Location:
    2 B; 2 22.09 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (32269120..32271877, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (32379101..32381915, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 39787 Neighboring gene CDKN1A interacting zinc finger protein 1 Neighboring gene lipocalin 2 Neighboring gene prostaglandin E synthase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular adaptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables molecular adaptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in anchoring junction IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cell junction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in cell junction ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with intermediate filament IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    colocalizes_with intermediate filament ISO
    Inferred from Sequence Orthology
    more info
     
    located_in kinetochore microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with kinetochore microtubule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in subapical part of cell IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in subapical part of cell ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    bublin coiled-coil protein
    Names
    UPF0184 protein C9orf16 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198001.3NP_932118.1  bublin coiled-coil protein

      See identical proteins and their annotated locations for NP_932118.1

      Status: VALIDATED

      Source sequence(s)
      AL808027
      Consensus CDS
      CCDS38103.1
      UniProtKB/Swiss-Prot
      P58686
      Related
      ENSMUSP00000038970.5, ENSMUST00000048792.5
      Conserved Domains (1) summary
      pfam03670
      Location:183
      UPF0184; Uncharacterized protein family (UPF0184)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      32269120..32271877 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)