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    1110008P14Rik RIKEN cDNA 1110008P14 gene [ Mus musculus (house mouse) ]

    Gene ID: 73737, updated on 31-Jan-2019

    Summary

    Official Symbol
    1110008P14Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1110008P14 geneprovided by MGI
    Primary source
    MGI:MGI:1920987
    See related
    Ensembl:ENSMUSG00000039195
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C79326
    Expression
    Broad expression in adrenal adult (RPKM 385.5), cortex adult (RPKM 183.4) and 23 other tissues See more
    Orthologs

    Genomic context

    See 1110008P14Rik in Genome Data Viewer
    Location:
    2; 2 B
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (32379101..32381915, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (32234621..32237435, complement)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 39787 Neighboring gene CDKN1A interacting zinc finger protein 1 Neighboring gene lipocalin 2 Neighboring gene prostaglandin E synthase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    UPF0184 protein C9orf16 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198001.2NP_932118.1  UPF0184 protein C9orf16 homolog

      See identical proteins and their annotated locations for NP_932118.1

      Status: VALIDATED

      Source sequence(s)
      AW488973, BY264831
      Consensus CDS
      CCDS38103.1
      UniProtKB/Swiss-Prot
      P58686
      Related
      ENSMUSP00000038970.4, ENSMUST00000048792.4
      Conserved Domains (1) summary
      pfam03670
      Location:183
      UPF0184; Uncharacterized protein family (UPF0184)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      32379101..32381915 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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