Format

Send to:

Choose Destination
    • Showing Current items.

    Mcee methylmalonyl CoA epimerase [ Mus musculus (house mouse) ]

    Gene ID: 73724, updated on 12-Aug-2018

    Summary

    Official Symbol
    Mceeprovided by MGI
    Official Full Name
    methylmalonyl CoA epimeraseprovided by MGI
    Primary source
    MGI:MGI:1920974
    See related
    Ensembl:ENSMUSG00000033429 Vega:OTTMUSG00000027294
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110007A04Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 21.9), kidney adult (RPKM 21.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mcee in Genome Data Viewer
    Location:
    7; 7 C
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (64392612..64412121)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (71537657..71557005)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) Neighboring gene SET translocation pseudogene Neighboring gene FANCD2/FANCI-associated nuclease 1 Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 2 Neighboring gene family with sequence similarity 189, member A1 Neighboring gene NSE3 homolog, SMC5-SMC6 complex component

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    methylmalonyl-CoA epimerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    methylmalonyl-CoA epimerase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    L-methylmalonyl-CoA metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    L-methylmalonyl-CoA metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    methylmalonyl-CoA epimerase, mitochondrial
    Names
    DL-methylmalonyl-CoA racemase
    NP_082902.1
    XP_006541286.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355124.1NP_001342053.1  methylmalonyl-CoA epimerase, mitochondrial isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC129199
      Conserved Domains (1) summary
      cl14632
      Location:49123
      VOC; vicinal oxygen chelate (VOC) family
    2. NM_028626.2NP_082902.1  methylmalonyl-CoA epimerase, mitochondrial isoform 1 precursor

      See identical proteins and their annotated locations for NP_082902.1

      Status: VALIDATED

      Source sequence(s)
      AC129199
      Consensus CDS
      CCDS21334.1
      UniProtKB/Swiss-Prot
      Q9D1I5
      Related
      ENSMUSP00000047855.8, OTTMUSP00000033953, ENSMUST00000037205.10
      Conserved Domains (1) summary
      TIGR03081
      Location:49177
      metmalonyl_epim; methylmalonyl-CoA epimerase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      64392612..64412121
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006541223.1XP_006541286.1  methylmalonyl-CoA epimerase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A0U1RQ27
      Related
      ENSMUSP00000146220.1, OTTMUSP00000074269, ENSMUST00000206194.1, OTTMUST00000142324
      Conserved Domains (1) summary
      cl14632
      Location:49123
      VOC; vicinal oxygen chelate (VOC) family
    Support Center