U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GAGE12C G antigen 12C [ Homo sapiens (human) ]

    Gene ID: 729422, updated on 10-Oct-2023

    Summary

    Official Symbol
    GAGE12Cprovided by HGNC
    Official Full Name
    G antigen 12Cprovided by HGNC
    Primary source
    HGNC:HGNC:28402
    See related
    Ensembl:ENSG00000237671 MIM:300727; AllianceGenome:HGNC:28402
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GAGE-12B
    Expression
    Restricted expression toward testis (RPKM 129.9) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See GAGE12C in Genome Data Viewer
    Location:
    Xp11.23
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (49532177..49539538)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (49296780..49304141)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:49216999-49217663 Neighboring gene G antigen 13 Neighboring gene G antigen 12B Neighboring gene G antigen 12D Neighboring gene G antigen 12E

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 

    General protein information

    Preferred Names
    G antigen 12B/C/D/E
    Names
    GAGE-12C
    g antigen 12C/D/E

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001098408.3NP_001091878.1  G antigen 12B/C/D/E

      See identical proteins and their annotated locations for NP_001091878.1

      Status: VALIDATED

      Source sequence(s)
      AC142497
      Consensus CDS
      CCDS43943.1
      UniProtKB/Swiss-Prot
      A1L429, A6NHF1, B7ZL74
      Related
      ENSP00000397103.2, ENST00000420398.3
      Conserved Domains (1) summary
      pfam05831
      Location:1111
      GAGE; GAGE protein

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      49532177..49539538
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)