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    Fam76b family with sequence similarity 76, member B [ Mus musculus (house mouse) ]

    Gene ID: 72826, updated on 31-Jan-2019

    Summary

    Official Symbol
    Fam76bprovided by MGI
    Official Full Name
    family with sequence similarity 76, member Bprovided by MGI
    Primary source
    MGI:MGI:1920076
    See related
    Ensembl:ENSMUSG00000037808
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C78303; 2810485I05Rik
    Expression
    Ubiquitous expression in CNS E14 (RPKM 10.9), whole brain E14.5 (RPKM 9.9) and 26 other tissues See more
    Orthologs

    Genomic context

    See Fam76b in Genome Data Viewer
    Location:
    9; 9 A1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (13827700..13854687)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (13632171..13650966)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 39291 Neighboring gene myotubularin related protein 2 Neighboring gene centrosomal protein 57 Neighboring gene peptidylprolyl isomerase B pseudogene Neighboring gene RIKEN cDNA 1700019J19 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    nuclear speck ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001358259.1NP_001345188.1  protein FAM76B isoform 2

      Status: VALIDATED

      Source sequence(s)
      BC050870, BG091267, CT010488
      Conserved Domains (1) summary
      pfam16046
      Location:6327
      FAM76; FAM76 protein
    2. NM_176836.4NP_789806.1  protein FAM76B isoform 1

      See identical proteins and their annotated locations for NP_789806.1

      Status: VALIDATED

      Source sequence(s)
      AK052430, BC043120, BG091267, CT010488
      Consensus CDS
      CCDS22819.1
      UniProtKB/Swiss-Prot
      Q80XP8
      Related
      ENSMUSP00000062642.5, ENSMUST00000059579.11
      Conserved Domains (1) summary
      pfam16046
      Location:6328
      FAM76; FAM76 protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      13827700..13854687
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011242612.2XP_011240914.1  protein FAM76B isoform X2

      See identical proteins and their annotated locations for XP_011240914.1

      Conserved Domains (1) summary
      pfam16046
      Location:6310
      FAM76; FAM76 protein
    2. XM_006510630.3XP_006510693.1  protein FAM76B isoform X1

      UniProtKB/Swiss-Prot
      Q80XP8
      Conserved Domains (1) summary
      pfam16046
      Location:6327
      FAM76; FAM76 protein
    3. XM_006510631.3XP_006510694.1  protein FAM76B isoform X3

      See identical proteins and their annotated locations for XP_006510694.1

      UniProtKB/TrEMBL
      D6RG49
      Related
      ENSMUSP00000115751.1, ENSMUST00000156680.1
      Conserved Domains (1) summary
      pfam16046
      Location:6230
      FAM76; FAM76 protein
    4. XM_011242613.1XP_011240915.1  protein FAM76B isoform X4

      Conserved Domains (1) summary
      pfam16046
      Location:16222
      FAM76; FAM76 protein

    RNA

    1. XR_001779022.1 RNA Sequence

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