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    NUTM2A NUT family member 2A [ Homo sapiens (human) ]

    Gene ID: 728118, updated on 5-Mar-2024

    Summary

    Official Symbol
    NUTM2Aprovided by HGNC
    Official Full Name
    NUT family member 2Aprovided by HGNC
    Primary source
    HGNC:HGNC:23438
    See related
    Ensembl:ENSG00000184923 AllianceGenome:HGNC:23438
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FAM22A
    Expression
    Ubiquitous expression in testis (RPKM 2.5), brain (RPKM 2.2) and 25 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See NUTM2A in Genome Data Viewer
    Location:
    10q23.2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (87225448..87234978)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (88109085..88118613)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (88985205..88994735)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene shieldin complex subunit 2 Neighboring gene uncharacterized LOC124902475 Neighboring gene uncharacterized LOC105378410 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3706 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2579 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:88965395-88965896 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:88987203-88987977 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:88988752-88989526 Neighboring gene NUTM2A antisense RNA 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:89102067-89102674 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2581 Neighboring gene long intergenic non-protein coding RNA 863 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:89114408-89114914 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:89114915-89115421 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:89119641-89120142 Neighboring gene NUT family member 2D

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    NUT family member 2A
    Names
    family with sequence similarity 22, member A
    protein FAM22A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099338.2NP_001092808.1  NUT family member 2A

      See identical proteins and their annotated locations for NP_001092808.1

      Status: VALIDATED

      Source sequence(s)
      AL157893, BC033231, BC092519, EG328792
      Consensus CDS
      CCDS44452.1
      UniProtKB/Swiss-Prot
      A6NMX5, C9JDI1, Q5VZW1, Q8IVF1
      Related
      ENSP00000371126.1, ENST00000381707.6
      Conserved Domains (1) summary
      pfam12881
      Location:136865
      NUT; NUT protein

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      87225448..87234978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      88109085..88118613
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)