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    Fam117b family with sequence similarity 117, member B [ Mus musculus (house mouse) ]

    Gene ID: 72750, updated on 24-Apr-2022

    Summary

    Official Symbol
    Fam117bprovided by MGI
    Official Full Name
    family with sequence similarity 117, member Bprovided by MGI
    Primary source
    MGI:MGI:1920000
    See related
    Ensembl:ENSMUSG00000041040 AllianceGenome:MGI:1920000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Als2cr13; 2810425F24Rik; 6330416D14Rik
    Summary
    Orthologous to human FAM117B (family with sequence similarity 117 member B). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in whole brain E14.5 (RPKM 17.1), CNS E18 (RPKM 16.8) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fam117b in Genome Data Viewer
    Location:
    1; 1 C2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (59952165..60024507)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (59913006..59985348)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (59969850..60042190)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene NOP58 ribonucleoprotein Neighboring gene small nucleolar RNA, C/D box 11 Neighboring gene bone morphogenetic protein receptor, type II (serine/threonine kinase) Neighboring gene arginyl-tRNA synthetase 2, mitochondrial pseudogene Neighboring gene islet cell autoantigen 1-like Neighboring gene WD repeat domain 12 Neighboring gene calcium response factor

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Markers

    Homology

    Clone Names

    • MGC90831

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein FAM117B
    Names
    amyotrophic lateral sclerosis 2 chromosomal region candidate gene 13 protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037725.3NP_001032814.1  protein FAM117B

      See identical proteins and their annotated locations for NP_001032814.1

      Status: VALIDATED

      Source sequence(s)
      AC125377, BC080299, BY455778
      Consensus CDS
      CCDS14986.1
      UniProtKB/Swiss-Prot
      Q3U3E2
      Related
      ENSMUSP00000041671.6, ENSMUST00000036540.12
      Conserved Domains (1) summary
      pfam15388
      Location:217524
      FAM117; Protein Family FAM117

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      59952165..60024507
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)