Format

Send to:

Choose Destination
    • Showing Current items.

    Ints8 integrator complex subunit 8 [ Mus musculus (house mouse) ]

    Gene ID: 72656, updated on 31-Jan-2019

    Summary

    Official Symbol
    Ints8provided by MGI
    Official Full Name
    integrator complex subunit 8provided by MGI
    Primary source
    MGI:MGI:1919906
    See related
    Ensembl:ENSMUSG00000040738
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AV063769; 2810013E07Rik; D130008D20Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 10.6), liver E14 (RPKM 8.4) and 25 other tissues See more
    Orthologs

    Genomic context

    See Ints8 in Genome Data Viewer
    Location:
    4; 4 A1
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (11199158..11254265, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (11126305..11181406, complement)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene transformation related protein 53 inducible nuclear protein 1 Neighboring gene RIKEN cDNA A630034I12 gene Neighboring gene cyclin E2 Neighboring gene dpy-19-like 4 (C. elegans) Neighboring gene epithelial splicing regulatory protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
     
    snRNA processing ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    integrator complex ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    integrator complex subunit 8
    Names
    int8

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001159595.1NP_001153067.1  integrator complex subunit 8

      See identical proteins and their annotated locations for NP_001153067.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AK140829, CJ134643
      Consensus CDS
      CCDS17967.1
      UniProtKB/Swiss-Prot
      Q80V86
      Related
      ENSMUSP00000103955.2, ENSMUST00000108319.8
    2. NM_178112.5NP_835213.3  integrator complex subunit 8

      See identical proteins and their annotated locations for NP_835213.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 3' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AK049513, CJ134643
      Consensus CDS
      CCDS17967.1
      UniProtKB/Swiss-Prot
      Q80V86
      Related
      ENSMUSP00000038418.3, ENSMUST00000044616.9

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      11199158..11254265 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017320392.1XP_017175881.1  integrator complex subunit 8 isoform X1

    RNA

    1. XR_390345.3 RNA Sequence

    Support Center