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    2610507B11Rik RIKEN cDNA 2610507B11 gene [ Mus musculus (house mouse) ]

    Gene ID: 72503, updated on 17-Mar-2019

    Summary

    Official Symbol
    2610507B11Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2610507B11 geneprovided by MGI
    Primary source
    MGI:MGI:1919753
    See related
    Ensembl:ENSMUSG00000010277
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    E1; AU022687; Kiaa0100; mKIAA0100; D11Bhm178e; D11Bhm179e
    Expression
    Ubiquitous expression in testis adult (RPKM 45.9), kidney adult (RPKM 37.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See 2610507B11Rik in Genome Data Viewer
    Location:
    11 B5; 11 46.74 cM
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (78261703..78290625)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (78075256..78104127)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene suppressor of Ty 6 Neighboring gene small nuclear ribonucleoprotein N pseudogene Neighboring gene stromal cell derived factor 2 Neighboring gene predicted gene 3948 Neighboring gene ribosomal protein S6 kinase related Neighboring gene sperm associated antigen 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA0100

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002004.2NP_001002004.2  protein KIAA0100 precursor

      See identical proteins and their annotated locations for NP_001002004.2

      Status: VALIDATED

      Source sequence(s)
      AK029280, AK149719, AK150829, BC075633
      Consensus CDS
      CCDS25097.1
      UniProtKB/Swiss-Prot
      Q5SYL3
      Related
      ENSMUSP00000010421.6, ENSMUST00000010421.6
      Conserved Domains (3) summary
      pfam10344
      Location:26674
      Fmp27; Mitochondrial protein from FMP27
      pfam10347
      Location:10281160
      Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
      pfam10351
      Location:17032176
      Apt1; Golgi-body localization protein domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      78261703..78290625
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006534313.2XP_006534376.1  protein KIAA0100 isoform X2

      Conserved Domains (2) summary
      pfam10344
      Location:26674
      Fmp27; Mitochondrial protein from FMP27
      pfam10347
      Location:10281160
      Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
    2. XM_017314790.1XP_017170279.1  protein KIAA0100 isoform X1

      Conserved Domains (3) summary
      pfam10344
      Location:1531
      Fmp27; Mitochondrial protein from FMP27
      pfam10347
      Location:8851017
      Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
      pfam10351
      Location:15602033
      Apt1; Golgi-body localization protein domain
    3. XM_006534312.1XP_006534375.1  protein KIAA0100 isoform X1

      Conserved Domains (3) summary
      pfam10344
      Location:1531
      Fmp27; Mitochondrial protein from FMP27
      pfam10347
      Location:8851017
      Fmp27_GFWDK; RNA pol II promoter Fmp27 protein domain
      pfam10351
      Location:15602033
      Apt1; Golgi-body localization protein domain

    RNA

    1. XR_001780057.1 RNA Sequence

    2. XR_001780058.1 RNA Sequence

    3. XR_001780059.1 RNA Sequence

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