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    Cenpn centromere protein N [ Mus musculus (house mouse) ]

    Gene ID: 72155, updated on 11-Mar-2018

    Summary

    Official Symbol
    Cenpnprovided by MGI
    Official Full Name
    centromere protein Nprovided by MGI
    Primary source
    MGI:MGI:1919405
    See related
    Ensembl:ENSMUSG00000031756 Vega:OTTMUSG00000061719
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI426416; AW545024; 2610510J17Rik
    Expression
    Biased expression in testis adult (RPKM 55.4), CNS E11.5 (RPKM 13.8) and 8 other tissues See more
    Orthologs

    Genomic context

    See Cenpn in Genome Data Viewer
    Location:
    8; 8 E1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (116921667..116941504)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (119445640..119465403)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930563M20 gene Neighboring gene predicted gene, 42045 Neighboring gene COX assembly mitochondrial protein 2 Neighboring gene ATM interactor Neighboring gene RIKEN cDNA 1700030J22 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
     
    kinetochore assembly IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
     
    kinetochore IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    centromere protein N
    Names
    CENP-N

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028131.3NP_082407.1  centromere protein N

      See identical proteins and their annotated locations for NP_082407.1

      Status: PROVISIONAL

      Source sequence(s)
      AC121101, AC162858
      Consensus CDS
      CCDS22693.1
      UniProtKB/Swiss-Prot
      Q9CZW2
      Related
      ENSMUSP00000034205.4, OTTMUSP00000078097, ENSMUST00000034205.4, OTTMUST00000150620
      Conserved Domains (1) summary
      pfam05238
      Location:3337
      CENP-N; Kinetochore protein CHL4 like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      116921667..116941504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531387.3XP_006531450.1  centromere protein N isoform X1

      See identical proteins and their annotated locations for XP_006531450.1

      UniProtKB/Swiss-Prot
      Q9CZW2
      Conserved Domains (1) summary
      pfam05238
      Location:3337
      CENP-N; Kinetochore protein CHL4 like
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