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    Tedc2 tubulin epsilon and delta complex 2 [ Mus musculus (house mouse) ]

    Gene ID: 72016, updated on 31-Jan-2019

    Summary

    Official Symbol
    Tedc2provided by MGI
    Official Full Name
    tubulin epsilon and delta complex 2provided by MGI
    Primary source
    MGI:MGI:1919266
    See related
    Ensembl:ENSMUSG00000024118
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1600002H07Rik
    Expression
    Ubiquitous expression in liver adult (RPKM 18.6), liver E14.5 (RPKM 10.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Tedc2 in Genome Data Viewer
    Location:
    17; 17 A3.3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 17 NC_000083.6 (24215054..24220939, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (24351999..24357714, complement)

    Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene ATPase, H+ transporting, lysosomal V0 subunit C Neighboring gene TBC1 domain family, member 24 Neighboring gene netrin 3 Neighboring gene cyclin F Neighboring gene microRNA 5134 Neighboring gene microRNA 6965

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    tubulin epsilon and delta complex protein 2; uncharacterized protein C16orf59 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028056.2NP_082332.1  tubulin epsilon and delta complex protein 2

      See identical proteins and their annotated locations for NP_082332.1

      Status: VALIDATED

      Source sequence(s)
      AK005395, BC072612
      Consensus CDS
      CCDS28479.1
      UniProtKB/Swiss-Prot
      Q6GQV0
      Related
      ENSMUSP00000024930.7, ENSMUST00000024930.7
      Conserved Domains (1) summary
      pfam15764
      Location:150434
      DUF4693; Domain of unknown function (DUF4693)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000083.6 Reference GRCm38.p4 C57BL/6J

      Range
      24215054..24220939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011246633.1XP_011244935.1  uncharacterized protein C16orf59 homolog isoform X2

      See identical proteins and their annotated locations for XP_011244935.1

      UniProtKB/Swiss-Prot
      Q6GQV0
      Conserved Domains (1) summary
      pfam15764
      Location:1249
      DUF4693; Domain of unknown function (DUF4693)
    2. XM_017317653.1XP_017173142.1  uncharacterized protein C16orf59 homolog isoform X2

      UniProtKB/Swiss-Prot
      Q6GQV0
      Conserved Domains (1) summary
      pfam15764
      Location:1249
      DUF4693; Domain of unknown function (DUF4693)
    3. XM_011246632.2XP_011244934.1  uncharacterized protein C16orf59 homolog isoform X1

      Conserved Domains (1) summary
      pfam15764
      Location:150389
      DUF4693; Domain of unknown function (DUF4693)
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