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    Apmap adipocyte plasma membrane associated protein [ Mus musculus (house mouse) ]

    Gene ID: 71881, updated on 23-Jun-2021

    Summary

    Official Symbol
    Apmapprovided by MGI
    Official Full Name
    adipocyte plasma membrane associated proteinprovided by MGI
    Primary source
    MGI:MGI:1919131
    See related
    Ensembl:ENSMUSG00000033096
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI314817; 2310001A20Rik
    Expression
    Ubiquitous expression in kidney adult (RPKM 26.0), subcutaneous fat pad adult (RPKM 25.0) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Apmap in Genome Data Viewer
    Location:
    2; 2 G3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (150425000..150450487, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (150583080..150608567, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (150408817..150434259, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene ankyrin and armadillo repeat containing pseudogene Neighboring gene cystatin F (leukocystatin) Neighboring gene predicted gene, 52532 Neighboring gene acyl-CoA synthetase short-chain family member 1 Neighboring gene RIKEN cDNA E130215H24 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (3)  1 citation
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables arylesterase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell surface ISO
    Inferred from Sequence Orthology
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    adipocyte plasma membrane-associated protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001356491.1NP_001343420.1  adipocyte plasma membrane-associated protein isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1.
      Source sequence(s)
      AL845174
      Conserved Domains (2) summary
      COG3386
      Location:1243
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:124211
      Str_synth; Strictosidine synthase
    2. NM_001356492.1NP_001343421.1  adipocyte plasma membrane-associated protein isoform 3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence and uses an alternate splice junction compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1.
      Source sequence(s)
      AL845174
      Conserved Domains (1) summary
      cl22863
      Location:592
      Str_synth; Strictosidine synthase
    3. NM_027977.3NP_082253.1  adipocyte plasma membrane-associated protein isoform 1

      See identical proteins and their annotated locations for NP_082253.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (1).
      Source sequence(s)
      AK009057, BY230335
      Consensus CDS
      CCDS16858.1
      UniProtKB/Swiss-Prot
      Q9D7N9
      Related
      ENSMUSP00000040840.7, ENSMUST00000046399.7
      Conserved Domains (4) summary
      COG3386
      Location:72319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cd05819
      Location:101136
      NHL; NHL repeat [structural motif]
      cl18310
      Location:95283
      NHL; NHL repeat unit of beta-propeller proteins
      cl22863
      Location:200287
      Str_synth; Strictosidine synthase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      150425000..150450487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006500198.4XP_006500261.1  adipocyte plasma membrane-associated protein isoform X1

      Conserved Domains (2) summary
      COG3386
      Location:33280
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:161248
      Str_synth; Strictosidine synthase
    2. XM_036162580.1XP_036018473.1  adipocyte plasma membrane-associated protein isoform X2

      Conserved Domains (1) summary
      cl22863
      Location:592
      Str_synth; Strictosidine synthase
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