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    Csl citrate synthase like [ Mus musculus (house mouse) ]

    Gene ID: 71832, updated on 31-Jan-2019

    Summary

    Official Symbol
    Cslprovided by MGI
    Official Full Name
    citrate synthase likeprovided by MGI
    Primary source
    MGI:MGI:1919082
    See related
    Ensembl:ENSMUSG00000046934
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700007H16Rik

    Genomic context

    See Csl in Genome Data Viewer
    Location:
    10; 10 D1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 10 NC_000076.6 (99757705..99759658, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (99220339..99222292, complement)

    Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 20110 Neighboring gene mediator of cell motility 1 pseudogene Neighboring gene predicted gene, 35101 Neighboring gene predicted gene, 35206 Neighboring gene predicted gene, 35437

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    citrate (Si)-synthase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    carbohydrate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    tricarboxylic acid cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    mitochondrial matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    citrate synthase-like protein
    NP_082221.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027945.3NP_082221.2  citrate synthase-like protein

      See identical proteins and their annotated locations for NP_082221.2

      Status: VALIDATED

      Source sequence(s)
      AC158633, AK005713, AK161295
      Consensus CDS
      CCDS24149.1
      UniProtKB/TrEMBL
      Q80X68, Q9DAM4
      Related
      ENSMUSP00000052373.4, ENSMUST00000056085.5
      Conserved Domains (2) summary
      cd06105
      Location:33459
      ScCit1-2_like; Saccharomyces cerevisiae (Sc) citrate synthases Cit1-2_like. Citrate synthases (CS) catalyzes the condensation of acetyl coenzyme A (AcCoA) with oxaloacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or ...
      PLN02456
      Location:29459
      PLN02456; citrate synthase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000076.6 Reference GRCm38.p4 C57BL/6J

      Range
      99757705..99759658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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