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    Armh3 armadillo-like helical domain containing 3 [ Mus musculus (house mouse) ]

    Gene ID: 71617, updated on 23-Jun-2021

    Summary

    Official Symbol
    Armh3provided by MGI
    Official Full Name
    armadillo-like helical domain containing 3provided by MGI
    Primary source
    MGI:MGI:1918867
    See related
    Ensembl:ENSMUSG00000039901
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI431055; AW050122; 9130011E15Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 5.9), whole brain E14.5 (RPKM 5.7) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Armh3 in Genome Data Viewer
    Location:
    19; 19 C3
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (45805799..45987071, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (45817362..45998632, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (45892634..46072978, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene O-GlcNAcase Neighboring gene Kv channel-interacting protein 2 Neighboring gene ribosomal protein L21 pseudogene Neighboring gene RIKEN cDNA 4930505N22 gene Neighboring gene HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 Neighboring gene LIM domain binding 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in regulation of Golgi organization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    armadillo-like helical domain-containing protein 3
    Names
    UPF0668 protein C10orf76 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198296.2NP_938038.2  armadillo-like helical domain-containing protein 3

      See identical proteins and their annotated locations for NP_938038.2

      Status: VALIDATED

      Source sequence(s)
      AK159765, BC058989
      Consensus CDS
      CCDS50454.1
      UniProtKB/Swiss-Prot
      Q6PD19
      Related
      ENSMUSP00000048454.8, ENSMUST00000045396.9
      Conserved Domains (1) summary
      pfam08427
      Location:441669
      DUF1741; Domain of unknown function (DUF1741)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      45805799..45987071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036161692.1XP_036017585.1  armadillo-like helical domain-containing protein 3 isoform X2

      Conserved Domains (1) summary
      pfam08427
      Location:441642
      DUF1741; Domain of unknown function (DUF1741)
    2. XM_011247345.3XP_011245647.1  armadillo-like helical domain-containing protein 3 isoform X1

      See identical proteins and their annotated locations for XP_011245647.1

      UniProtKB/Swiss-Prot
      Q6PD19
      Conserved Domains (1) summary
      pfam08427
      Location:441669
      DUF1741; Domain of unknown function (DUF1741)
    3. XM_036161693.1XP_036017586.1  armadillo-like helical domain-containing protein 3 isoform X2

      Conserved Domains (1) summary
      pfam08427
      Location:441642
      DUF1741; Domain of unknown function (DUF1741)
    4. XM_006527344.5XP_006527407.1  armadillo-like helical domain-containing protein 3 isoform X3

      Conserved Domains (1) summary
      pfam08427
      Location:441594
      DUF1741; Domain of unknown function (DUF1741)

    RNA

    1. XR_386511.4 RNA Sequence

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