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    4933416I08Rik RIKEN cDNA 4933416I08 gene [ Mus musculus (house mouse) ]

    Gene ID: 71159, updated on 8-Dec-2018

    Summary

    Official Symbol
    4933416I08Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933416I08 geneprovided by MGI
    Primary source
    MGI:MGI:1918409
    See related
    Ensembl:ENSMUSG00000079593
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Annotation information
    Annotation category: suggests misassembly
    Annotation category: partial on reference assembly
    Expression
    Restricted expression toward testis adult (RPKM 2.3) See more

    Genomic context

    See 4933416I08Rik in Genome Data Viewer
    Location:
    X; X A5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) X NC_000086.7 (53577073..53580003, complement)

    Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene embryonic testis differentiation Neighboring gene predicted gene, 36046 Neighboring gene retrotransposon Gag like 8C Neighboring gene splicing factor 3a, subunit 3 pseudogene

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_000086.7 Chromosome X Reference GRCm38.p4 C57BL/6J

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    uncharacterized protein LOC71159

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027700.1NP_081976.1  uncharacterized protein LOC71159

      See identical proteins and their annotated locations for NP_081976.1

      Status: VALIDATED

      Source sequence(s)
      AK016833, AK163858, CN831548
      UniProtKB/TrEMBL
      Q3TQ67, Q9D434
      Related
      ENSMUSP00000123472.1, ENSMUST00000129769.7
      Conserved Domains (1) summary
      pfam14444
      Location:203254
      S1-like; S1-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000086.7 Reference GRCm38.p4 C57BL/6J

      Range
      53577073..53580003 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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