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    Pgm2l1 phosphoglucomutase 2-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 70974, updated on 12-Aug-2018

    Summary

    Official Symbol
    Pgm2l1provided by MGI
    Official Full Name
    phosphoglucomutase 2-like 1provided by MGI
    Primary source
    MGI:MGI:1918224
    See related
    Ensembl:ENSMUSG00000030729 Vega:OTTMUSG00000032728
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BM32A; AI553438; 4931406N15Rik
    Expression
    Biased expression in cortex adult (RPKM 17.9), CNS E18 (RPKM 14.6) and 12 other tissues See more
    Orthologs

    Genomic context

    See Pgm2l1 in Genome Data Viewer
    Location:
    7; 7 E2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (100227283..100278872)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (107376117..107427382)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene cyclin B1 pseudogene Neighboring gene predicted gene, 34877 Neighboring gene glutathione peroxidase 2, pseudogene 1 Neighboring gene procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III Neighboring gene protein phosphatase methylesterase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    glucose-1,6-bisphosphate synthase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    glucose-1,6-bisphosphate synthase activity ISO
    Inferred from Sequence Orthology
    more info
     
    intramolecular transferase activity, phosphotransferases IEA
    Inferred from Electronic Annotation
    more info
     
    isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    phosphoglucomutase activity ISO
    Inferred from Sequence Orthology
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    organic substance metabolic process IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    glucose 1,6-bisphosphate synthase
    NP_081905.1
    XP_006508267.1
    XP_006508268.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027629.3NP_081905.1  glucose 1,6-bisphosphate synthase

      See identical proteins and their annotated locations for NP_081905.1

      Status: VALIDATED

      Source sequence(s)
      AC121815, AC122269, AK016437, BB633030, CF531609, CK379061
      Consensus CDS
      CCDS40035.1
      UniProtKB/Swiss-Prot
      Q8CAA7
      Related
      ENSMUSP00000081998.3, OTTMUSP00000043567, ENSMUST00000084935.10, OTTMUST00000081426
      Conserved Domains (2) summary
      cd05799
      Location:64606
      PGM2; This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and ...
      PTZ00150
      Location:24620
      PTZ00150; phosphoglucomutase-2-like protein; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      100227283..100278872
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006508205.1XP_006508268.1  glucose 1,6-bisphosphate synthase isoform X1

      See identical proteins and their annotated locations for XP_006508268.1

      UniProtKB/Swiss-Prot
      Q8CAA7
      Related
      ENSMUSP00000054782.8, OTTMUSP00000043568, ENSMUST00000054436.8, OTTMUST00000081427
      Conserved Domains (2) summary
      cd05799
      Location:64606
      PGM2; This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and ...
      PTZ00150
      Location:24620
      PTZ00150; phosphoglucomutase-2-like protein; Provisional
    2. XM_006508204.1XP_006508267.1  glucose 1,6-bisphosphate synthase isoform X1

      See identical proteins and their annotated locations for XP_006508267.1

      UniProtKB/Swiss-Prot
      Q8CAA7
      Conserved Domains (2) summary
      cd05799
      Location:64606
      PGM2; This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and ...
      PTZ00150
      Location:24620
      PTZ00150; phosphoglucomutase-2-like protein; Provisional

    RNA

    1. XR_378271.1 RNA Sequence

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