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    CPSF4 cleavage and polyadenylation specific factor 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708119, updated on 17-Aug-2024

    Summary

    Official Symbol
    CPSF4provided by VGNC
    Official Full Name
    cleavage and polyadenylation specific factor 4provided by VGNC
    Primary source
    VGNC:VGNC:71474
    Locus tag
    EGK_13489
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See CPSF4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (41550205..41568893)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (124876976..124895604)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene BUD31 homolog Neighboring gene pentatricopeptide repeat-containing protein 1, mitochondrial Neighboring gene SAP domain-containing ribonucleoprotein-like Neighboring gene ATP synthase membrane subunit f Neighboring gene transfer RNA tryptophan (anticodon CCA)

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    cleavage and polyadenylation specificity factor subunit 4
    Names
    cleavage and polyadenylation specific factor 4, 30kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257618.1NP_001244547.1  cleavage and polyadenylation specificity factor subunit 4

      See identical proteins and their annotated locations for NP_001244547.1

      Status: PROVISIONAL

      Source sequence(s)
      JU332627
      UniProtKB/TrEMBL
      H9FP23
      Conserved Domains (2) summary
      COG5084
      Location:25176
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
      COG5222
      Location:201233
      COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      41550205..41568893
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134315.1XP_014989801.1  cleavage and polyadenylation specificity factor subunit 4 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YI44, F7BI49, G7MNR2
      Conserved Domains (2) summary
      COG5084
      Location:25211
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
      COG5222
      Location:226258
      COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    2. XM_015134318.1XP_014989804.1  cleavage and polyadenylation specificity factor subunit 4 isoform X4

      Conserved Domains (2) summary
      COG5084
      Location:25176
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
      COG5222
      Location:200232
      COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    3. XM_015134316.1XP_014989802.1  cleavage and polyadenylation specificity factor subunit 4 isoform X2

      Conserved Domains (1) summary
      COG5084
      Location:25132
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
    4. XM_015134317.1XP_014989803.1  cleavage and polyadenylation specificity factor subunit 4 isoform X3

      Conserved Domains (2) summary
      smart00356
      Location:6388
      ZnF_C3H1; zinc finger
      COG5084
      Location:25132
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
    5. XM_028844958.1XP_028700791.1  cleavage and polyadenylation specificity factor subunit 4 isoform X6

      Conserved Domains (2) summary
      COG5084
      Location:2123
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
      COG5222
      Location:148180
      COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    6. XM_028844957.1XP_028700790.1  cleavage and polyadenylation specificity factor subunit 4 isoform X5

      Conserved Domains (2) summary
      COG5084
      Location:2158
      YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
      COG5222
      Location:173205
      COG5222; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]