Format

Send to:

Choose Destination
    • Showing Current items.

    Arrdc2 arrestin domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 70807, updated on 13-Jul-2021

    Summary

    Official Symbol
    Arrdc2provided by MGI
    Official Full Name
    arrestin domain containing 2provided by MGI
    Primary source
    MGI:MGI:1918057
    See related
    Ensembl:ENSMUSG00000002910
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ilad1; 4632416I05Rik
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 30.6), ovary adult (RPKM 22.5) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Arrdc2 in Genome Data Viewer
    Location:
    8; 8 B3.3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (71287773..71293173, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (70835129..70839720, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (73359037..73363619, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene microtubule associated serine/threonine kinase 3 Neighboring gene microRNA 7240 Neighboring gene interleukin 12 receptor, beta 1 Neighboring gene potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 Neighboring gene coiled-coil domain containing 124

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasmic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    arrestin domain-containing protein 2
    Names
    induced by lysergic acid diethylamide-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027560.1NP_081836.1  arrestin domain-containing protein 2

      See identical proteins and their annotated locations for NP_081836.1

      Status: PROVISIONAL

      Source sequence(s)
      AK014582
      Consensus CDS
      CCDS40376.1
      UniProtKB/Swiss-Prot
      Q9D668
      Related
      ENSMUSP00000002989.10, ENSMUST00000002989.11
      Conserved Domains (2) summary
      smart01017
      Location:180307
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:9158
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      71287773..71293173 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036154287.1XP_036010180.1  arrestin domain-containing protein 2 isoform X1

      Conserved Domains (1) summary
      smart01017
      Location:28155
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    2. XM_017312963.3XP_017168452.1  arrestin domain-containing protein 2 isoform X1

      Conserved Domains (1) summary
      smart01017
      Location:28155
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain

    RNA

    1. XR_379046.4 RNA Sequence

    Support Center