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    Naa30 N(alpha)-acetyltransferase 30, NatC catalytic subunit [ Mus musculus (house mouse) ]

    Gene ID: 70646, updated on 23-May-2018

    Summary

    Official Symbol
    Naa30provided by MGI
    Official Full Name
    N(alpha)-acetyltransferase 30, NatC catalytic subunitprovided by MGI
    Primary source
    MGI:MGI:1922259
    See related
    Ensembl:ENSMUSG00000036282 Vega:OTTMUSG00000032783
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Nat12; AI447922; AW322455; 4930487N19Rik; 5730533P17Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 8.0), whole brain E14.5 (RPKM 7.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Naa30 in Genome Data Viewer
    Location:
    14; 14 C1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (49172246..49190888)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (49791902..49810706)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene exocyst complex component 5 Neighboring gene adaptor-related protein complex 5, mu 1 subunit Neighboring gene ribosomal protein L19, pseudogene 3 Neighboring gene coiled-coil domain containing 198 Neighboring gene solute carrier family 35, member F4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    peptide alpha-N-acetyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    peptide alpha-N-acetyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity, transferring acyl groups IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    N-terminal peptidyl-methionine acetylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    N-terminal peptidyl-methionine acetylation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    NatC complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    NatC complex ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with polysome ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    N-alpha-acetyltransferase 30
    Names
    N-acetyltransferase 12
    N-acetyltransferase MAK3 homolog
    Nalpha acetyltransferase 30
    natC catalytic subunit
    NP_081768.2
    XP_006519605.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027492.2NP_081768.2  N-alpha-acetyltransferase 30

      Status: VALIDATED

      Source sequence(s)
      AC154227, AK015640, BC158065
      Consensus CDS
      CCDS84137.1
      UniProtKB/Swiss-Prot
      Q8CES0
      Related
      ENSMUSP00000121679.1, OTTMUSP00000043696, ENSMUST00000153488.8, OTTMUST00000081629
      Conserved Domains (2) summary
      COG0456
      Location:211364
      RimI; Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]
      pfam00583
      Location:283341
      Acetyltransf_1; Acetyltransferase (GNAT) family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      49172246..49190888
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006519542.3XP_006519605.1  N-alpha-acetyltransferase 30 isoform X1

      Conserved Domains (2) summary
      COG0456
      Location:222375
      RimI; Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]
      pfam00583
      Location:294352
      Acetyltransf_1; Acetyltransferase (GNAT) family

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001081430.1: Suppressed sequence

      Description
      NM_001081430.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
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