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    Mospd1 motile sperm domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 70380, updated on 24-Jan-2018

    Summary

    Official Symbol
    Mospd1provided by MGI
    Official Full Name
    motile sperm domain containing 1provided by MGI
    Primary source
    MGI:MGI:1917630
    See related
    Ensembl:ENSMUSG00000023074 Vega:OTTMUSG00000017344
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1810018L05Rik
    Expression
    Broad expression in placenta adult (RPKM 12.9), liver E14 (RPKM 6.9) and 19 other tissues See more
    Orthologs

    Genomic context

    See Mospd1 in Genome Data Viewer
    Location:
    X; X A5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) X NC_000086.7 (53344594..53370562, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (50698198..50723669, complement)

    Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 122, member B Neighboring gene family with sequence similarity 122, member C Neighboring gene ribosomal protein L13 pseudogene Neighboring gene casein kinase 1, gamma 3 pseudogene Neighboring gene embryonic testis differentiation

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Homology

    Clone Names

    • MGC103065

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of transcription by RNA polymerase II IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    perinuclear region of cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    motile sperm domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001290514.1NP_001277443.1  motile sperm domain-containing protein 1 isoform 2

      See identical proteins and their annotated locations for NP_001277443.1

      Status: VALIDATED

      Source sequence(s)
      AK139795, BF467665, BG068741, BG077592, CJ046213, DV651027
      Consensus CDS
      CCDS72381.1
      UniProtKB/Swiss-Prot
      Q8VEL0
      UniProtKB/TrEMBL
      Q3UT40
      Related
      ENSMUSP00000094182.2, OTTMUSP00000018938, ENSMUST00000096447.8, OTTMUST00000042127
      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain
    2. NM_001358456.1NP_001345385.1  motile sperm domain-containing protein 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      BG077592, BX679674
      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain
    3. NM_027409.5NP_081685.1  motile sperm domain-containing protein 1 isoform 1

      See identical proteins and their annotated locations for NP_081685.1

      Status: VALIDATED

      Source sequence(s)
      AK007533, BF467665, BG068741, BG077592, CJ046213, DV651027
      Consensus CDS
      CCDS30131.1
      UniProtKB/Swiss-Prot
      Q8VEL0
      Related
      ENSMUSP00000023836.3, ENSMUST00000023836.3
      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain

    RNA

    1. NR_110964.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC085100, BG077592, CJ046213

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000086.7 Reference GRCm38.p4 C57BL/6J

      Range
      53344594..53370562 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006541538.2XP_006541601.1  motile sperm domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006541601.1

      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain
    2. XM_011251017.1XP_011249319.1  motile sperm domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011249319.1

      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain
    3. XM_006541537.3XP_006541600.1  motile sperm domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain
    4. XM_006541541.3XP_006541604.1  motile sperm domain-containing protein 1 isoform X3

      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain
    5. XM_006541540.3XP_006541603.1  motile sperm domain-containing protein 1 isoform X2

      See identical proteins and their annotated locations for XP_006541603.1

      UniProtKB/Swiss-Prot
      Q8VEL0
      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain
    6. XM_017318617.1XP_017174106.1  motile sperm domain-containing protein 1 isoform X2

      UniProtKB/Swiss-Prot
      Q8VEL0
      Conserved Domains (1) summary
      pfam00635
      Location:16113
      Motile_Sperm; MSP (Major sperm protein) domain

    RNA

    1. XR_882288.1 RNA Sequence

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