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    Arl16 ADP-ribosylation factor-like 16 [ Mus musculus (house mouse) ]

    Gene ID: 70317, updated on 25-Nov-2021

    Summary

    Official Symbol
    Arl16provided by MGI
    Official Full Name
    ADP-ribosylation factor-like 16provided by MGI
    Primary source
    MGI:MGI:1917567
    See related
    Ensembl:ENSMUSG00000057594
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2600005N12Rik
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 18.4), subcutaneous fat pad adult (RPKM 11.9) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Arl16 in Genome Data Viewer
    Location:
    11; 11 E2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (120355152..120358426, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (120464326..120467600, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (120325640..120328914, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 6G, cGMP-specific, rod, gamma Neighboring gene oxidoreductase like domain containing 1 Neighboring gene coiled-coil domain containing 137 Neighboring gene HGF-regulated tyrosine kinase substrate Neighboring gene mitochondrial ribosomal protein L12

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ADP-ribosylation factor-like protein 16

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_197995.2NP_932112.2  ADP-ribosylation factor-like protein 16

      See identical proteins and their annotated locations for NP_932112.2

      Status: VALIDATED

      Source sequence(s)
      AK038349, AK140077, BF472168
      Consensus CDS
      CCDS36390.1
      UniProtKB/TrEMBL
      B1ATY8, Q3V3L8
      Related
      ENSMUSP00000076188.7, ENSMUST00000076921.7
      Conserved Domains (1) summary
      cd00878
      Location:1168
      Arf_Arl; ADP-ribosylation factor(Arf)/Arf-like (Arl) small GTPases

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      120355152..120358426 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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