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    Gorasp2 golgi reassembly stacking protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 70231, updated on 2-Oct-2018

    Summary

    Official Symbol
    Gorasp2provided by MGI
    Official Full Name
    golgi reassembly stacking protein 2provided by MGI
    Primary source
    MGI:MGI:2135962
    See related
    Ensembl:ENSMUSG00000014959 Vega:OTTMUSG00000013118
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    p59; GRS2; GOLPH2; GRASP55; AW552058; 0610011A07Rik; 2410043M02Rik; 5730520M13Rik; 9430094F20Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 74.9), adrenal adult (RPKM 71.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Gorasp2 in Genome Data Viewer
    Location:
    2; 2 C2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (70661509..70691725)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (70499566..70529782)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene non-histone chromosomal protein HMG-17 pseudogene Neighboring gene predicted gene, 46745 Neighboring gene predicted gene, 38528 Neighboring gene tousled-like kinase 1 Neighboring gene predicted gene, 39842

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi organization ISO
    Inferred from Sequence Orthology
    more info
     
    organelle assembly ISO
    Inferred from Sequence Orthology
    more info
     
    organelle organization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    Golgi medial cisterna ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Golgi reassembly-stacking protein 2
    Names
    golgi reassembly-stacking protein of 55 kDa

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027352.4NP_081628.3  Golgi reassembly-stacking protein 2

      See identical proteins and their annotated locations for NP_081628.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) is the protein-coding transcript.
      Source sequence(s)
      AK169382, BU707592
      Consensus CDS
      CCDS16109.1
      UniProtKB/Swiss-Prot
      Q99JX3
      Related
      ENSMUSP00000028509.4, OTTMUSP00000014108, ENSMUST00000028509.10, OTTMUST00000031664
      Conserved Domains (2) summary
      pfam04495
      Location:69205
      GRASP55_65; GRASP55/65 PDZ-like domain
      cl00117
      Location:14100
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

    RNA

    1. NR_027343.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) contains an alternate exon compared to variant 1, that disrupts the reading frame. This variant is not thought to be protein-coding.
      Source sequence(s)
      AK168928, AK169382, BU707592
      Related
      ENSMUST00000112201.7, OTTMUST00000031663

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      70661509..70691725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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