Format

Send to:

Choose Destination
    • Showing Current items.

    Anxa13 annexin A13 [ Mus musculus (house mouse) ]

    Gene ID: 69787, updated on 26-Jun-2020

    Summary

    Official Symbol
    Anxa13provided by MGI
    Official Full Name
    annexin A13provided by MGI
    Primary source
    MGI:MGI:1917037
    See related
    Ensembl:ENSMUSG00000055114
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AV055219; 1810034H17Rik
    Annotation information
    Annotation category: partial on reference assembly
    Expression
    Biased expression in large intestine adult (RPKM 22.5), small intestine adult (RPKM 5.4) and 2 other tissues See more
    Orthologs

    Genomic context

    See Anxa13 in Genome Data Viewer
    Location:
    15 D1; 15 24.66 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    108.20200622 current GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (58341464..58389274, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (58173019..58220829, complement)

    Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 36193 Neighboring gene kelch-like 38 Neighboring gene family with sequence similarity 91, member A1 Neighboring gene fer-1-like 6 (C. elegans) Neighboring gene predicted gene, 36451

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    calcium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    calcium-dependent phospholipid binding ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylglycerol binding ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylserine binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    extrinsic component of membrane ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    annexin A13
    Names
    annexin XIII
    annexin-13

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027211.2NP_081487.1  annexin A13

      See identical proteins and their annotated locations for NP_081487.1

      Status: VALIDATED

      Source sequence(s)
      AJ306451, AV289596, BB617542
      UniProtKB/Swiss-Prot
      Q99JG3
      Related
      ENSMUST00000227274.1
      Conserved Domains (1) summary
      pfam00191
      Location:91156
      Annexin; Annexin

    RefSeqs of Annotated Genomes: Mus musculus Updated Annotation Release 108.

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p6 C57BL/6J

    Genomic

    1. NC_000081.6 Reference GRCm38.p6 C57BL/6J

      Range
      58341464..58389274 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p6 PATCHES

    Genomic

    1. NW_019168525.1 Reference GRCm38.p6 PATCHES

      Range
      357936..414195 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center