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    Aldh16a1 aldehyde dehydrogenase 16 family, member A1 [ Mus musculus (house mouse) ]

    Gene ID: 69748, updated on 23-Jun-2021

    Summary

    Official Symbol
    Aldh16a1provided by MGI
    Official Full Name
    aldehyde dehydrogenase 16 family, member A1provided by MGI
    Primary source
    MGI:MGI:1916998
    See related
    Ensembl:ENSMUSG00000007833
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI452234; 2410004H02Rik
    Expression
    Ubiquitous expression in duodenum adult (RPKM 63.9), small intestine adult (RPKM 38.4) and 25 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Aldh16a1 in Genome Data Viewer
    Location:
    7; 7 B3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (44791257..44804008, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45141833..45154536, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (52397210..52409908, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13A Neighboring gene small nucleolar RNA, C/D box 32A Neighboring gene FMS-like tyrosine kinase 3 ligand Neighboring gene PIH1 domain containing 1 Neighboring gene solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 Neighboring gene microRNA 7055 Neighboring gene golgi-associated olfactory signaling regulator

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • FLJ00209, MGC19339

    General protein information

    Preferred Names
    aldehyde dehydrogenase family 16 member A1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145954.2NP_666066.1  aldehyde dehydrogenase family 16 member A1

      See identical proteins and their annotated locations for NP_666066.1

      Status: VALIDATED

      Source sequence(s)
      AK161198, AV231409
      Consensus CDS
      CCDS21231.1
      UniProtKB/Swiss-Prot
      Q571I9
      UniProtKB/TrEMBL
      A0A1B0GSU0
      Related
      ENSMUSP00000148069.2, ENSMUST00000209963.2
      Conserved Domains (1) summary
      cl11961
      Location:19491
      ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      44791257..44804008 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036153424.1XP_036009317.1  aldehyde dehydrogenase family 16 member A1 isoform X1

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