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    Iqcg IQ motif containing G [ Mus musculus (house mouse) ]

    Gene ID: 69707, updated on 31-Jan-2019

    Summary

    Official Symbol
    Iqcgprovided by MGI
    Official Full Name
    IQ motif containing Gprovided by MGI
    Primary source
    MGI:MGI:1916957
    See related
    Ensembl:ENSMUSG00000035578
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    repro1; esgd12d; G1-374-12; stubby12d; 2400003L07Rik
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 5.8), testis adult (RPKM 5.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Iqcg in Genome Data Viewer
    Location:
    16; 16 B3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (33014270..33056418, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (33014356..33056272, complement)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein Neighboring gene forty-two-three domain containing 1 Neighboring gene leucine-rich repeats and calponin homology (CH) domain containing 3 Neighboring gene predicted gene 6611 Neighboring gene ribosomal protein L35A Neighboring gene leishmanolysin-like (metallopeptidase M8 family) Neighboring gene microRNA 1947

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    Hsp70 protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    calmodulin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    calmodulin binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    cilium organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    sperm axoneme assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    sperm axoneme assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    spermatid development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    cilium IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol EXP
    Inferred from Experiment
    more info
    PubMed 
    manchette IDA
    Inferred from Direct Assay
    more info
    PubMed 
    motile cilium IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    motile cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    sperm flagellum IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    sperm flagellum IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    dynein regulatory complex protein 9; IQ domain-containing protein G

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178378.3NP_848465.1  dynein regulatory complex protein 9

      See identical proteins and their annotated locations for NP_848465.1

      Status: VALIDATED

      Source sequence(s)
      AC126023, BC049990, BY120455
      Consensus CDS
      CCDS37316.1
      UniProtKB/Swiss-Prot
      Q80W32
      Related
      ENSMUSP00000110752.1, ENSMUST00000115100.8
      Conserved Domains (1) summary
      pfam04111
      Location:202343
      APG6; Autophagy protein Apg6

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      33014270..33056418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006522519.3XP_006522582.1  IQ domain-containing protein G isoform X2

      Conserved Domains (1) summary
      pfam04111
      Location:139280
      APG6; Autophagy protein Apg6
    2. XM_011246004.2XP_011244306.1  IQ domain-containing protein G isoform X1

      See identical proteins and their annotated locations for XP_011244306.1

      UniProtKB/Swiss-Prot
      Q80W32
      Conserved Domains (1) summary
      pfam04111
      Location:202343
      APG6; Autophagy protein Apg6
    3. XM_006522520.3XP_006522583.1  IQ domain-containing protein G isoform X3

      See identical proteins and their annotated locations for XP_006522583.1

      Conserved Domains (1) summary
      pfam04111
      Location:69210
      APG6; Autophagy protein Apg6
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