Format

Send to:

Choose Destination
    • Showing Current items.

    Txndc15 thioredoxin domain containing 15 [ Mus musculus (house mouse) ]

    Gene ID: 69672, updated on 23-Jun-2021

    Summary

    Official Symbol
    Txndc15provided by MGI
    Official Full Name
    thioredoxin domain containing 15provided by MGI
    Primary source
    MGI:MGI:1916922
    See related
    Ensembl:ENSMUSG00000021497
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    UNQ335; C5orf14; AI854086; 2310047H23Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 32.5), liver adult (RPKM 30.0) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Txndc15 in Genome Data Viewer
    Location:
    13; 13 B1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (55862463..55874040)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (55714650..55726227)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (55816011..55827588)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene DEAD box helicase 46 Neighboring gene RIKEN cDNA B230219D22 gene Neighboring gene pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 Neighboring gene RIKEN cDNA 4930451E10 gene Neighboring gene cation channel, sperm associated 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell projection organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cilium assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in cilium assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of smoothened signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cilium IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cilium IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    thioredoxin domain-containing protein 15
    Names
    disulfide isomerase

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175150.3NP_780359.2  thioredoxin domain-containing protein 15 precursor

      See identical proteins and their annotated locations for NP_780359.2

      Status: PROVISIONAL

      Source sequence(s)
      BC062180
      Consensus CDS
      CCDS26553.1
      UniProtKB/Swiss-Prot
      Q6P6J9
      Related
      ENSMUSP00000021959.10, ENSMUST00000021959.11
      Conserved Domains (1) summary
      cd02999
      Location:172275
      PDI_a_ERp44_like; PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      55862463..55874040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center