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    Ubl7 ubiquitin-like 7 (bone marrow stromal cell-derived) [ Mus musculus (house mouse) ]

    Gene ID: 69459, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ubl7provided by MGI
    Official Full Name
    ubiquitin-like 7 (bone marrow stromal cell-derived)provided by MGI
    Primary source
    MGI:MGI:1916709
    See related
    Ensembl:ENSMUSG00000055720
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2300004C15Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 213.4), adrenal adult (RPKM 70.1) and 28 other tissues See more
    Orthologs
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    Try the new Transcript table

    Genomic context

    See Ubl7 in Genome Data Viewer
    Location:
    9 B; 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (57818259..57837252)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (57910978..57929970)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (57758793..57777775)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 7547 Neighboring gene meiotic nuclear divisions 1 homolog pseudogene Neighboring gene sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A Neighboring gene cytochrome P450, family 11, subfamily a, polypeptide 1 Neighboring gene ADP-ribosylation factor-like 6 interacting protein 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables polyubiquitin modification-dependent protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122873.1NP_001116345.1  ubiquitin-like protein 7

      See identical proteins and their annotated locations for NP_001116345.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      BQ033240, BY230605, CX203425, EL608156
      Consensus CDS
      CCDS23234.1
      UniProtKB/Swiss-Prot
      Q91W67
      Related
      ENSMUSP00000126019.2, ENSMUST00000163329.2
      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    2. NM_027086.3NP_081362.2  ubiquitin-like protein 7

      See identical proteins and their annotated locations for NP_081362.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AK009025, BQ033240, CX203425, EL608156
      Consensus CDS
      CCDS23234.1
      UniProtKB/Swiss-Prot
      Q91W67
      Related
      ENSMUSP00000150925.2, ENSMUST00000216925.2
      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      57818259..57837252
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006511406.5XP_006511469.1  ubiquitin-like protein 7 isoform X1

      See identical proteins and their annotated locations for XP_006511469.1

      UniProtKB/Swiss-Prot
      Q91W67
      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    2. XM_006511408.4XP_006511471.1  ubiquitin-like protein 7 isoform X1

      See identical proteins and their annotated locations for XP_006511471.1

      UniProtKB/Swiss-Prot
      Q91W67
      Related
      ENSMUSP00000149748.2, ENSMUST00000216841.2
      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    3. XM_036155245.1XP_036011138.1  ubiquitin-like protein 7 isoform X1

      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    4. XM_030244563.2XP_030100423.1  ubiquitin-like protein 7 isoform X1

      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    5. XM_006511407.4XP_006511470.1  ubiquitin-like protein 7 isoform X1

      See identical proteins and their annotated locations for XP_006511470.1

      UniProtKB/Swiss-Prot
      Q91W67
      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    6. XM_030244564.2XP_030100424.1  ubiquitin-like protein 7 isoform X1

      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    7. XM_030244567.2XP_030100427.1  ubiquitin-like protein 7 isoform X1

      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
    8. XM_030244565.2XP_030100425.1  ubiquitin-like protein 7 isoform X1

      Conserved Domains (2) summary
      cd14326
      Location:346375
      UBA_UBL7; UBA domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
      cd01815
      Location:798
      Ubl_UBL7; ubiquitin-like (Ubl) domain found in ubiquitin-like protein 7 (UBL7) and similar proteins
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