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    Thap7 THAP domain containing 7 [ Mus musculus (house mouse) ]

    Gene ID: 69009, updated on 2-Oct-2018

    Summary

    Official Symbol
    Thap7provided by MGI
    Official Full Name
    THAP domain containing 7provided by MGI
    Primary source
    MGI:MGI:1916259
    See related
    Ensembl:ENSMUSG00000022760 Vega:OTTMUSG00000025193
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1810004B07Rik
    Expression
    Ubiquitous expression in ovary adult (RPKM 39.8), adrenal adult (RPKM 37.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See Thap7 in Genome Data Viewer
    Location:
    16 A3; 16
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (17527959..17531156, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (17528075..17531145, complement)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene apoptosis-inducing factor, mitochondrion-associated 3 Neighboring gene leucine-zipper-like transcriptional regulator, 1 Neighboring gene leucine rich repeat containing 74B Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    C2H2 zinc finger domain binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    C2H2 zinc finger domain binding ISO
    Inferred from Sequence Orthology
    more info
     
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    identical protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein N-terminus binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein N-terminus binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    negative regulation of transcription, DNA-templated IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    negative regulation of transcription, DNA-templated ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    nuclear membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nuclear membrane ISO
    Inferred from Sequence Orthology
    more info
     
    nuclear speck IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nuclear speck ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    THAP domain-containing protein 7

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026909.2NP_081185.1  THAP domain-containing protein 7

      See identical proteins and their annotated locations for NP_081185.1

      Status: PROVISIONAL

      Source sequence(s)
      AC113006
      Consensus CDS
      CCDS28004.1
      UniProtKB/Swiss-Prot
      Q8VCZ3
      Related
      ENSMUSP00000097701.3, OTTMUSP00000030526, ENSMUST00000100125.11, OTTMUST00000062019
      Conserved Domains (2) summary
      smart00980
      Location:493
      THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
      cl26464
      Location:111221
      Atrophin-1; Atrophin-1 family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      17527959..17531156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006522512.3XP_006522575.1  THAP domain-containing protein 7 isoform X2

      Conserved Domains (1) summary
      smart00980
      Location:474
      THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
    2. XM_011246003.2XP_011244305.1  THAP domain-containing protein 7 isoform X4

      Related
      ENSMUSP00000156319.1, ENSMUST00000232041.1
    3. XM_006522511.3XP_006522574.1  THAP domain-containing protein 7 isoform X1

      See identical proteins and their annotated locations for XP_006522574.1

      UniProtKB/Swiss-Prot
      Q8VCZ3
      Related
      ENSMUSP00000156168.1, ENSMUST00000231548.1
      Conserved Domains (2) summary
      smart00980
      Location:493
      THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
      cl26464
      Location:111221
      Atrophin-1; Atrophin-1 family
    4. XM_006522513.3XP_006522576.1  THAP domain-containing protein 7 isoform X3

      Conserved Domains (1) summary
      PHA03247
      Location:59169
      PHA03247; large tegument protein UL36; Provisional
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