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    Cab39l calcium binding protein 39-like [ Mus musculus (house mouse) ]

    Gene ID: 69008, updated on 31-Jan-2019

    Summary

    Official Symbol
    Cab39lprovided by MGI
    Official Full Name
    calcium binding protein 39-likeprovided by MGI
    Primary source
    MGI:MGI:1914081
    See related
    Ensembl:ENSMUSG00000021981
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MO2L; AA589432; 1500031K13Rik; 2810425O13Rik; 4930520C08Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 15.1), testis adult (RPKM 7.4) and 28 other tissues See more
    Orthologs

    Genomic context

    See Cab39l in Genome Data Viewer
    Location:
    14; 14 C3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (59440955..59548903)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (60059818..60167740)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 45935 Neighboring gene PHD finger protein 11C Neighboring gene SET domain, bifurcated 2 Neighboring gene cytidine and dCMP deaminase domain containing 1 Neighboring gene aldo-keto reductase family 1, member B8 pseudogene Neighboring gene ribosomal protein S9 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    contributes_to protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    signal transduction by protein phosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    calcium-binding protein 39-like
    Names
    MO25beta
    mo25-like protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360591.1NP_001347520.1  calcium-binding protein 39-like

      Status: VALIDATED

      Source sequence(s)
      AK030474, AK053642, AW122324, BQ562937, BY789575
      Conserved Domains (1) summary
      pfam08569
      Location:61324
      Mo25; Mo25-like
    2. NM_001360592.1NP_001347521.1  calcium-binding protein 39-like

      Status: VALIDATED

      Source sequence(s)
      AK030474, AK053642, AK076867, AW122324, BY789575
      Conserved Domains (1) summary
      pfam08569
      Location:61324
      Mo25; Mo25-like
    3. NM_001360593.1NP_001347522.1  calcium-binding protein 39-like

      Status: VALIDATED

      Source sequence(s)
      AK030474, AK053642, AW122324, CX563320
      Conserved Domains (1) summary
      pfam08569
      Location:61324
      Mo25; Mo25-like
    4. NM_026908.4NP_081184.3  calcium-binding protein 39-like

      See identical proteins and their annotated locations for NP_081184.3

      Status: VALIDATED

      Source sequence(s)
      AK030474, AK053642, AW122324, BY789575
      Consensus CDS
      CCDS27171.1
      UniProtKB/Swiss-Prot
      Q9DB16
      Related
      ENSMUSP00000022553.5, ENSMUST00000022553.5
      Conserved Domains (1) summary
      pfam08569
      Location:61324
      Mo25; Mo25-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      59440955..59548903
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017316176.1XP_017171665.1  calcium-binding protein 39-like isoform X1

      UniProtKB/Swiss-Prot
      Q9DB16
      Conserved Domains (1) summary
      pfam08569
      Location:61324
      Mo25; Mo25-like
    2. XM_017316177.1XP_017171666.1  calcium-binding protein 39-like isoform X2

    3. XM_006519494.2XP_006519557.1  calcium-binding protein 39-like isoform X1

      UniProtKB/Swiss-Prot
      Q9DB16
      Conserved Domains (1) summary
      pfam08569
      Location:61324
      Mo25; Mo25-like
    4. XM_006519495.2XP_006519558.1  calcium-binding protein 39-like isoform X1

      UniProtKB/Swiss-Prot
      Q9DB16
      Conserved Domains (1) summary
      pfam08569
      Location:61324
      Mo25; Mo25-like
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