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    Ubac2 ubiquitin associated domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 68889, updated on 5-Aug-2018

    Summary

    Official Symbol
    Ubac2provided by MGI
    Official Full Name
    ubiquitin associated domain containing 2provided by MGI
    Primary source
    MGI:MGI:1916139
    See related
    Ensembl:ENSMUSG00000041765
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Phgdhl1; AW554959; 1190008A14Rik
    Expression
    Ubiquitous expression in duodenum adult (RPKM 38.1), testis adult (RPKM 37.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Ubac2 in Genome Data Viewer
    Location:
    14; 14 E5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (121878556..122021035)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (122277828..122420257)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene dedicator of cytokinesis 9 Neighboring gene RIKEN cDNA 1810041H14 gene Neighboring gene predicted gene 9395 Neighboring gene predicted gene, 46485 Neighboring gene G protein-coupled receptor 18 Neighboring gene G protein-coupled receptor 183 Neighboring gene predicted gene, 33473 Neighboring gene translocase of inner mitochondrial membrane 8A2 Neighboring gene RIKEN cDNA A330035P11 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    negative regulation of retrograde protein transport, ER to cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    protein localization to endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ubiquitin-associated domain-containing protein 2
    Names
    UBA domain-containing protein 2
    phosphoglycerate dehydrogenase like 1
    phosphoglycerate dehydrogenase-like protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026861.2NP_081137.2  ubiquitin-associated domain-containing protein 2 precursor

      See identical proteins and their annotated locations for NP_081137.2

      Status: VALIDATED

      Source sequence(s)
      AK049109, BC017635, BY080555
      Consensus CDS
      CCDS37019.1
      UniProtKB/Swiss-Prot
      Q8R1K1
      UniProtKB/TrEMBL
      Q8R1R2
      Related
      ENSMUSP00000043245.5, ENSMUST00000039803.6
      Conserved Domains (1) summary
      cd14305
      Location:306343
      UBA_UBAC2; UBA domain found in ubiquitin-associated domain-containing protein 2 (UBAC2) and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      121878556..122021035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006519492.2XP_006519555.1  ubiquitin-associated domain-containing protein 2 isoform X1

      Conserved Domains (1) summary
      cd14305
      Location:290327
      UBA_UBAC2; UBA domain found in ubiquitin-associated domain-containing protein 2 (UBAC2) and similar proteins
    2. XM_006519493.3XP_006519556.1  ubiquitin-associated domain-containing protein 2 isoform X2

      Conserved Domains (1) summary
      cd14305
      Location:123160
      UBA_UBAC2; UBA domain found in ubiquitin-associated domain-containing protein 2 (UBAC2) and similar proteins
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