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    Btbd10 BTB (POZ) domain containing 10 [ Mus musculus (house mouse) ]

    Gene ID: 68815, updated on 23-Jun-2021

    Summary

    Official Symbol
    Btbd10provided by MGI
    Official Full Name
    BTB (POZ) domain containing 10provided by MGI
    Primary source
    MGI:MGI:1916065
    See related
    Ensembl:ENSMUSG00000038187
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gmr; Gmrp1; 1110056N09Rik
    Expression
    Broad expression in testis adult (RPKM 11.6), CNS E18 (RPKM 7.1) and 26 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Btbd10 in Genome Data Viewer
    Location:
    7; 7 F1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (112914838..112970734, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (113315631..113371527, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (120459158..120512853, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930543E12 gene Neighboring gene aryl hydrocarbon receptor nuclear translocator-like Neighboring gene predicted gene, 33721 Neighboring gene parathyroid hormone Neighboring gene BCL2-associated transcription factor 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of neuron death IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of phosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in positive regulation of phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in fibrillar center ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    BTB/POZ domain-containing protein 10
    Names
    K+ channel tetramerization protein
    glucose metabolism-related protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133700.2NP_598461.1  BTB/POZ domain-containing protein 10

      See identical proteins and their annotated locations for NP_598461.1

      Status: PROVISIONAL

      Source sequence(s)
      AC156605, AC156987
      Consensus CDS
      CCDS21755.1
      UniProtKB/Swiss-Prot
      Q80X66
      Related
      ENSMUSP00000048530.8, ENSMUST00000047091.14
      Conserved Domains (1) summary
      cd18385
      Location:165274
      BTB_POZ_BTBD10_GMRP1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 10 (BTBD10)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      112914838..112970734 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006508162.3XP_006508225.1  BTB/POZ domain-containing protein 10 isoform X3

      See identical proteins and their annotated locations for XP_006508225.1

      UniProtKB/TrEMBL
      E9Q6L8
      Related
      ENSMUSP00000113632.2, ENSMUST00000119278.8
      Conserved Domains (1) summary
      cd18385
      Location:117226
      BTB_POZ_BTBD10_GMRP1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 10 (BTBD10)
    2. XM_006508160.3XP_006508223.1  BTB/POZ domain-containing protein 10 isoform X2

      See identical proteins and their annotated locations for XP_006508223.1

      UniProtKB/Swiss-Prot
      Q80X66
      Conserved Domains (1) summary
      cd18385
      Location:165274
      BTB_POZ_BTBD10_GMRP1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 10 (BTBD10)
    3. XM_006508161.3XP_006508224.1  BTB/POZ domain-containing protein 10 isoform X3

      See identical proteins and their annotated locations for XP_006508224.1

      UniProtKB/TrEMBL
      E9Q6L8
      Conserved Domains (1) summary
      cd18385
      Location:117226
      BTB_POZ_BTBD10_GMRP1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 10 (BTBD10)
    4. XM_006508163.3XP_006508226.1  BTB/POZ domain-containing protein 10 isoform X3

      See identical proteins and their annotated locations for XP_006508226.1

      UniProtKB/TrEMBL
      E9Q6L8
      Conserved Domains (1) summary
      cd18385
      Location:117226
      BTB_POZ_BTBD10_GMRP1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 10 (BTBD10)
    5. XM_011241890.3XP_011240192.1  BTB/POZ domain-containing protein 10 isoform X2

      See identical proteins and their annotated locations for XP_011240192.1

      UniProtKB/Swiss-Prot
      Q80X66
      Conserved Domains (1) summary
      cd18385
      Location:165274
      BTB_POZ_BTBD10_GMRP1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 10 (BTBD10)
    6. XM_006508159.5XP_006508222.1  BTB/POZ domain-containing protein 10 isoform X1

      UniProtKB/TrEMBL
      E9Q6Y9
      Related
      ENSMUSP00000113496.2, ENSMUST00000117577.8
      Conserved Domains (1) summary
      cd18385
      Location:173282
      BTB_POZ_BTBD10_GMRP1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 10 (BTBD10)
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