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    Rnf166 ring finger protein 166 [ Mus musculus (house mouse) ]

    Gene ID: 68718, updated on 22-May-2018

    Summary

    Official Symbol
    Rnf166provided by MGI
    Official Full Name
    ring finger protein 166provided by MGI
    Primary source
    MGI:MGI:1915968
    See related
    Ensembl:ENSMUSG00000014470 Vega:OTTMUSG00000030756
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Zfp313l; AW555115; 1110031E24Rik
    Expression
    Ubiquitous expression in thymus adult (RPKM 75.7), adrenal adult (RPKM 60.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Rnf166 in Genome Data Viewer
    Location:
    8; 8 E1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (122466145..122476068, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (124990047..124999964, complement)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9330133O14 gene Neighboring gene predicted gene, 20735 Neighboring gene snail family zinc finger 3 Neighboring gene cytosolic thiouridylase subunit 2 Neighboring gene piezo-type mechanosensitive ion channel component 1 Neighboring gene predicted gene, 34847

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    RING finger protein 166
    Names
    zinc finger protein 313; zinc finger protein 228

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033142.2NP_001028314.1  RING finger protein 166

      See identical proteins and their annotated locations for NP_001028314.1

      Status: PROVISIONAL

      Source sequence(s)
      AC114917
      Consensus CDS
      CCDS22740.1
      UniProtKB/Swiss-Prot
      Q3U9F6
      UniProtKB/TrEMBL
      A2RS02
      Related
      ENSMUSP00000014614.3, OTTMUSP00000040032, ENSMUST00000014614.3, OTTMUST00000076138
      Conserved Domains (2) summary
      pfam05605
      Location:149208
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      cd16549
      Location:3076
      RING-HC_RNF166; RING finger, HC subclass, found in RING finger protein 166 (RNF166) and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      122466145..122476068 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006531336.1XP_006531399.1  RING finger protein 166 isoform X3

      See identical proteins and their annotated locations for XP_006531399.1

      Conserved Domains (2) summary
      pfam02809
      Location:112128
      UIM; Ubiquitin interaction motif
      pfam05605
      Location:4099
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    2. XM_017312954.1XP_017168443.1  RING finger protein 166 isoform X2

    3. XM_017312953.1XP_017168442.1  RING finger protein 166 isoform X1

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