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    Hnrnpul2 heterogeneous nuclear ribonucleoprotein U-like 2 [ Mus musculus (house mouse) ]

    Gene ID: 68693, updated on 23-Jun-2021

    Summary

    Official Symbol
    Hnrnpul2provided by MGI
    Official Full Name
    heterogeneous nuclear ribonucleoprotein U-like 2provided by MGI
    Primary source
    MGI:MGI:1915943
    See related
    Ensembl:ENSMUSG00000071659
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hnr; Hnrpul2; AI465155; 1110031M08Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 45.1), CNS E14 (RPKM 27.9) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Hnrnpul2 in Genome Data Viewer
    Location:
    19; 19 A
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (8796765..8811507)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (8819401..8834143)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (8893891..8908632)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene polymerase (RNA) II (DNA directed) polypeptide G Neighboring gene zinc finger and BTB domain containing 3 Neighboring gene tetratricopeptide repeat domain 9C Neighboring gene Berardinelli-Seip congenital lipodystrophy 2 (seipin) Neighboring gene guanine nucleotide binding protein (G protein), gamma 3 Neighboring gene LRRN4 C-terminal like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    heterogeneous nuclear ribonucleoprotein U-like protein 2
    Names
    MLF1-associated nuclear protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081196.1NP_001074665.1  heterogeneous nuclear ribonucleoprotein U-like protein 2

      See identical proteins and their annotated locations for NP_001074665.1

      Status: VALIDATED

      Source sequence(s)
      AC129217
      Consensus CDS
      CCDS37908.1
      UniProtKB/Swiss-Prot
      Q00PI9
      Related
      ENSMUSP00000094515.4, ENSMUST00000096753.5
      Conserved Domains (4) summary
      smart00513
      Location:337
      SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
      pfam13671
      Location:452597
      AAA_33; AAA domain
      cd12884
      Location:244415
      SPRY_hnRNP; SPRY domain in heterogeneous nuclear ribonucleoprotein U-like (hnRNP) protein 1
      cl17190
      Location:452634
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      8796765..8811507
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003952813.2 RNA Sequence

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