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    Serhl serine hydrolase-like [ Mus musculus (house mouse) ]

    Gene ID: 68607, updated on 22-May-2018

    Summary

    Official Symbol
    Serhlprovided by MGI
    Official Full Name
    serine hydrolase-likeprovided by MGI
    Primary source
    MGI:MGI:1890404
    See related
    Ensembl:ENSMUSG00000058586 Vega:OTTMUSG00000035724
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AU019786; 0610008B10Rik; 1110019M09Rik
    Expression
    Ubiquitous expression in large intestine adult (RPKM 23.5), colon adult (RPKM 16.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Serhl in Genome Data Viewer
    Location:
    15; 15 E1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 15 NC_000081.6 (83100192..83116675)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (82930635..82947101)

    Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 32620 Neighboring gene predicted gene, 41366 Neighboring gene ribosomal RNA processing 7 homolog A (S. cerevisiae) Neighboring gene polymerase (DNA-directed), delta interacting protein 3 Neighboring gene RNA U12, small nuclear

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    hydrolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasmic vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion HDA PubMed 
    peroxisome ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    serine hydrolase-like protein
    Names
    SHL

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023475.3NP_075964.1  serine hydrolase-like protein

      See identical proteins and their annotated locations for NP_075964.1

      Status: VALIDATED

      Source sequence(s)
      AK003827, BC064069, BY082798
      Consensus CDS
      CCDS49682.1
      UniProtKB/Swiss-Prot
      Q9EPB5
      UniProtKB/TrEMBL
      Q80XK9
      Related
      ENSMUSP00000077345.4, OTTMUSP00000050301, ENSMUST00000078218.10, OTTMUST00000091324
      Conserved Domains (2) summary
      COG0596
      Location:15303
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:28129
      Abhydrolase_5; Alpha/beta hydrolase family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000081.6 Reference GRCm38.p4 C57BL/6J

      Range
      83100192..83116675
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006521319.3XP_006521382.1  serine hydrolase-like protein isoform X1

    RNA

    1. XR_384036.3 RNA Sequence

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