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    Pdrg1 p53 and DNA damage regulated 1 [ Mus musculus (house mouse) ]

    Gene ID: 68559, updated on 27-Jan-2018

    Summary

    Official Symbol
    Pdrg1provided by MGI
    Official Full Name
    p53 and DNA damage regulated 1provided by MGI
    Primary source
    MGI:MGI:1915809
    See related
    Ensembl:ENSMUSG00000027472 Vega:OTTMUSG00000015778
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pdrg; AU020945; AV006589; 1110004D19Rik
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 53.3), heart adult (RPKM 47.4) and 28 other tissues See more
    Orthologs

    Genomic context

    See Pdrg1 in Genome Data Viewer
    Location:
    2; 2 H1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (153008890..153015383, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (152834626..152841119, complement)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase-like 15 Neighboring gene tubulin tyrosine ligase-like family, member 9 Neighboring gene predicted gene 14199 Neighboring gene X-linked Kx blood group related 7 Neighboring gene predicted gene, 32286 Neighboring gene cerebral cavernous malformation 2-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    protein folding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    prefoldin complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    p53 and DNA damage-regulated protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178939.2NP_849270.1  p53 and DNA damage-regulated protein 1

      See identical proteins and their annotated locations for NP_849270.1

      Status: PROVISIONAL

      Source sequence(s)
      AL928862
      Consensus CDS
      CCDS16904.1
      UniProtKB/Swiss-Prot
      P59048
      UniProtKB/TrEMBL
      Q3UKN2
      Related
      ENSMUSP00000028972.8, OTTMUSP00000016804, ENSMUST00000028972.8, OTTMUST00000037490
      Conserved Domains (1) summary
      cl09111
      Location:27108
      Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      153008890..153015383 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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