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    Smim14 small integral membrane protein 14 [ Mus musculus (house mouse) ]

    Gene ID: 68552, updated on 23-Jun-2021

    Summary

    Official Symbol
    Smim14provided by MGI
    Official Full Name
    small integral membrane protein 14provided by MGI
    Primary source
    MGI:MGI:1915802
    See related
    Ensembl:ENSMUSG00000037822
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MAd; MAd4; 1110003E01Rik; 1700127H04Rik; 5430439C17Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 25.8), genital fat pad adult (RPKM 20.0) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Smim14 in Genome Data Viewer
    Location:
    5; 5 C3.1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (65604187..65694492, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (65446844..65537149, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (65839994..65884074, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene VISTA enhancer mm1569 Neighboring gene lipoic acid synthetase Neighboring gene UDP-glucose dehydrogenase Neighboring gene predicted gene, 40309 Neighboring gene ubiquitin-conjugating enzyme E2K Neighboring gene PDS5 cohesin associated factor A Neighboring gene predicted gene, 24399

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC7185

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within blastocyst hatching IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    small integral membrane protein 14

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001376971.1NP_001363900.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    2. NM_001376972.1NP_001363901.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    3. NM_001376973.1NP_001363902.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Related
      ENSMUSP00000113456.2, ENSMUST00000121661.8
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    4. NM_001376974.1NP_001363903.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    5. NM_001376975.1NP_001363904.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    6. NM_001376976.1NP_001363905.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    7. NM_001376977.1NP_001363906.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    8. NM_001376978.1NP_001363907.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    9. NM_001376979.1NP_001363908.1  small integral membrane protein 14

      Status: VALIDATED

      Source sequence(s)
      AC136513
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
    10. NM_133697.4NP_598458.1  small integral membrane protein 14

      See identical proteins and their annotated locations for NP_598458.1

      Status: VALIDATED

      Source sequence(s)
      AC136513, AK164394, CJ052807
      Consensus CDS
      CCDS19309.1
      UniProtKB/Swiss-Prot
      Q91VT8
      Related
      ENSMUSP00000122363.2, ENSMUST00000139122.8
      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      65604187..65694492 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036165458.1XP_036021351.1  small integral membrane protein 14 isoform X1

      Conserved Domains (1) summary
      pfam11027
      Location:397
      DUF2615; Protein of unknown function (DUF2615)
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