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    Mrpl13 mitochondrial ribosomal protein L13 [ Mus musculus (house mouse) ]

    Gene ID: 68537, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mrpl13provided by MGI
    Official Full Name
    mitochondrial ribosomal protein L13provided by MGI
    Primary source
    MGI:MGI:2137218
    See related
    Ensembl:ENSMUSG00000022370
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110002D09Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 43.7), liver E14 (RPKM 37.8) and 23 other tissues See more
    Orthologs
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    Genomic context

    See Mrpl13 in Genome Data Viewer
    Location:
    15; 15 D1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (55397491..55420708, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (55534095..55557312, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (55365650..55388867, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene collagen, type XIV, alpha 1 Neighboring gene predicted gene, 52209 Neighboring gene predicted gene, 18787 Neighboring gene Mdm2, transformed 3T3 cell double minute p53 binding protein Neighboring gene syntrophin, basic 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within translation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of mitochondrial large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in mitochondrial ribosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrial ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    39S ribosomal protein L13, mitochondrial
    Names
    L13mt
    MRP-L13
    NP_081035.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026759.3NP_081035.1  39S ribosomal protein L13, mitochondrial

      See identical proteins and their annotated locations for NP_081035.1

      Status: PROVISIONAL

      Source sequence(s)
      AK003283
      Consensus CDS
      CCDS27477.1
      UniProtKB/Swiss-Prot
      Q9D1P0
      Related
      ENSMUSP00000130722.2, ENSMUST00000172387.8
      Conserved Domains (1) summary
      pfam00572
      Location:17140
      Ribosomal_L13; Ribosomal protein L13

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      55397491..55420708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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