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    Rraga Ras-related GTP binding A [ Mus musculus (house mouse) ]

    Gene ID: 68441, updated on 23-May-2018

    Summary

    Official Symbol
    Rragaprovided by MGI
    Official Full Name
    Ras-related GTP binding Aprovided by MGI
    Primary source
    MGI:MGI:1915691
    See related
    Ensembl:ENSMUSG00000070934 Vega:OTTMUSG00000007449
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    RAGA; FIP-1; AI255374; 1300010C19Rik
    Orthologs

    Genomic context

    See Rraga in Genome Data Viewer
    Location:
    4; 4 C4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (86575673..86577285)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (86221577..86223189)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene stabilizer of axonemal microtubules 1 Neighboring gene stabilizer of axonemal microtubules 1, opposite strand Neighboring gene HAUS augmin-like complex, subunit 6 Neighboring gene small Cajal body-specific RNA 8 Neighboring gene perilipin 2 Neighboring gene perilipin 2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    GTP binding ISO
    Inferred from Sequence Orthology
    more info
     
    GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    GTPase activity ISO
    Inferred from Sequence Orthology
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    phosphoprotein binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    ubiquitin protein ligase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    cell death ISO
    Inferred from Sequence Orthology
    more info
     
    cellular protein localization ISO
    Inferred from Sequence Orthology
    more info
     
    cellular response to amino acid starvation ISO
    Inferred from Sequence Orthology
    more info
     
    cellular response to amino acid stimulus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cellular response to amino acid stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    cellular response to starvation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    modulation by virus of host morphology or physiology ISO
    Inferred from Sequence Orthology
    more info
     
    negative regulation of autophagy ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of TOR signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    positive regulation of TORC1 signaling ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of cytolysis ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of autophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    regulation of cytolysis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    EGO complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    colocalizes_with GATOR1 complex ISO
    Inferred from Sequence Orthology
    more info
     
    Gtr1-Gtr2 GTPase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    lysosome ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ras-related GTP-binding protein A
    Names
    rag A
    rraga

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178376.3NP_848463.1  ras-related GTP-binding protein A

      See identical proteins and their annotated locations for NP_848463.1

      Status: VALIDATED

      Source sequence(s)
      BC048245, BY128554
      Consensus CDS
      CCDS18306.1
      UniProtKB/Swiss-Prot
      Q80X95
      Related
      ENSMUSP00000088591.6, OTTMUSP00000007958, ENSMUST00000091064.7, OTTMUST00000017228
      Conserved Domains (1) summary
      cd11384
      Location:9292
      RagA_like; Rag GTPase, subfamily of Ras-related GTPases, includes Ras-related GTP-binding proteins A and B

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      86575673..86577285
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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