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    Rpl24 ribosomal protein L24 [ Mus musculus (house mouse) ]

    Gene ID: 68193, updated on 9-Sep-2018

    Summary

    Official Symbol
    Rpl24provided by MGI
    Official Full Name
    ribosomal protein L24provided by MGI
    Primary source
    MGI:MGI:1915443
    See related
    Ensembl:ENSMUSG00000098274 Vega:OTTMUSG00000025840
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bst; 0610008L05Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 192.3), liver E14 (RPKM 190.1) and 24 other tissues See more
    Orthologs

    Genomic context

    See Rpl24 in Genome Data Viewer
    Location:
    16 C1.1; 16 33.74 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (55966275..55971437)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (55966388..55971550)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein L11 pseudogene Neighboring gene predicted gene 6958 Neighboring gene zinc finger and BTB domain containing 11, opposite strand 1 Neighboring gene zinc finger and BTB domain containing 11 Neighboring gene PEST proteolytic signal containing nuclear protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Spontaneous (1) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    assembly of large subunit precursor of preribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasmic translation ISO
    Inferred from Sequence Orthology
    more info
     
    exit from mitosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    mitotic cell cycle checkpoint IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    optic nerve development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    retina development in camera-type eye IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    retinal ganglion cell axon guidance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    ribosomal large subunit assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ribosomal large subunit assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    translation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    translation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytosolic large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    cytosolic ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    polysomal ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    synapse EXP
    Inferred from Experiment
    more info
    PubMed 
    synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    60S ribosomal protein L24
    Names
    belly spot and tail

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_024218.4NP_077180.1  60S ribosomal protein L24

      See identical proteins and their annotated locations for NP_077180.1

      Status: VALIDATED

      Source sequence(s)
      AK018731, BQ100599, BY031373
      Consensus CDS
      CCDS28218.1
      UniProtKB/Swiss-Prot
      Q8BP67
      Related
      ENSMUSP00000023269.4, OTTMUSP00000031508, ENSMUST00000023269.4, OTTMUST00000063661
      Conserved Domains (1) summary
      pfam01246
      Location:264
      Ribosomal_L24e; Ribosomal protein L24e

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      55966275..55971437
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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