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    Denr density-regulated protein [ Mus musculus (house mouse) ]

    Gene ID: 68184, updated on 31-Jan-2019

    Summary

    Official Symbol
    Denrprovided by MGI
    Official Full Name
    density-regulated proteinprovided by MGI
    Primary source
    MGI:MGI:1915434
    See related
    Ensembl:ENSMUSG00000023106
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1500003K04Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 21.0), liver E14 (RPKM 12.7) and 24 other tissues See more
    Orthologs

    Genomic context

    See Denr in Genome Data Viewer
    Location:
    5; 5 F
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (123907269..123928832)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (124357284..124378841)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene hydroxycarboxylic acid receptor 2 Neighboring gene hydrocarboxylic acid receptor 1 Neighboring gene coiled-coil domain containing 62 Neighboring gene predicted gene, 46922 Neighboring gene huntingtin interacting protein 1 related

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    IRES-dependent viral translational initiation ISO
    Inferred from Sequence Orthology
    more info
     
    formation of translation preinitiation complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    formation of translation preinitiation complex ISO
    Inferred from Sequence Orthology
    more info
     
    ribosome disassembly ISO
    Inferred from Sequence Orthology
    more info
     
    translation IEA
    Inferred from Electronic Annotation
    more info
     
    translation reinitiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    translational initiation IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    density-regulated protein
    Names
    DRP

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026603.4NP_080879.1  density-regulated protein

      See identical proteins and their annotated locations for NP_080879.1

      Status: PROVISIONAL

      Source sequence(s)
      AC122753
      Consensus CDS
      CCDS39275.1
      UniProtKB/Swiss-Prot
      Q9CQJ6
      Related
      ENSMUSP00000023869.8, ENSMUST00000023869.14
      Conserved Domains (1) summary
      TIGR01159
      Location:28193
      DRP1; density-regulated protein DRP1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      123907269..123928832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011248238.1XP_011246540.1  density-regulated protein isoform X2

      Conserved Domains (1) summary
      cl00229
      Location:1147
      eIF1_SUI1_like; Eukaryotic initiation factor 1 and related proteins
    2. XM_006530452.2XP_006530515.1  density-regulated protein isoform X1

      Conserved Domains (1) summary
      cl00229
      Location:12163
      eIF1_SUI1_like; Eukaryotic initiation factor 1 and related proteins
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