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    Cep70 centrosomal protein 70 [ Mus musculus (house mouse) ]

    Gene ID: 68121, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cep70provided by MGI
    Official Full Name
    centrosomal protein 70provided by MGI
    Primary source
    MGI:MGI:1915371
    See related
    Ensembl:ENSMUSG00000056267
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bite; 6720484E09Rik; C030018L16Rik
    Expression
    Broad expression in testis adult (RPKM 3.5), CNS E14 (RPKM 3.3) and 20 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Cep70 in Genome Data Viewer
    Location:
    9; 9 E3.3
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (99065640..99205569)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (99183584..99325879)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (99143887..99200823)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene poly(A) binding protein, cytoplasmic 1 pseudogene Neighboring gene predicted gene, 33857 Neighboring gene predicted gene 2950 Neighboring gene Fas apoptotic inhibitory molecule like Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 8 pseudogene Neighboring gene RIKEN cDNA 4930422M22 gene Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 14 pseudogene Neighboring gene extended synaptotagmin-like protein 3 Neighboring gene muscle and microspikes RAS Neighboring gene predicted gene, 53543 Neighboring gene RIKEN cDNA 1600029I14 gene Neighboring gene NME/NM23 family member 9

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables gamma-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    centrosomal protein of 70 kDa
    Names
    p10-binding protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023873.4NP_076362.2  centrosomal protein of 70 kDa

      See identical proteins and their annotated locations for NP_076362.2

      Status: VALIDATED

      Source sequence(s)
      BC071260, BY728192
      Consensus CDS
      CCDS40738.1
      UniProtKB/Swiss-Prot
      Q6IQY5
      Related
      ENSMUSP00000091312.4, ENSMUST00000093795.10
      Conserved Domains (1) summary
      TIGR02169
      Location:98351
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      99065640..99205569
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017313546.3XP_017169035.1  centrosomal protein of 70 kDa isoform X3

    2. XM_030244539.2XP_030100399.1  centrosomal protein of 70 kDa isoform X3

    3. XM_030244541.2XP_030100401.1  centrosomal protein of 70 kDa isoform X4

    4. XM_036155222.1XP_036011115.1  centrosomal protein of 70 kDa isoform X4

    5. XM_036155221.1XP_036011114.1  centrosomal protein of 70 kDa isoform X4

    6. XM_030244540.2XP_030100400.1  centrosomal protein of 70 kDa isoform X4

    7. XM_030244537.2XP_030100397.1  centrosomal protein of 70 kDa isoform X2

      Conserved Domains (1) summary
      TIGR02169
      Location:57310
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    8. XM_030244536.2XP_030100396.1  centrosomal protein of 70 kDa isoform X1

      Conserved Domains (1) summary
      TIGR02169
      Location:98351
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    9. XM_030244534.2XP_030100394.1  centrosomal protein of 70 kDa isoform X1

      Conserved Domains (1) summary
      TIGR02169
      Location:98351
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    10. XM_030244535.2XP_030100395.1  centrosomal protein of 70 kDa isoform X1

      Conserved Domains (1) summary
      TIGR02169
      Location:98351
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    11. XM_030244533.2XP_030100393.1  centrosomal protein of 70 kDa isoform X1

      Conserved Domains (1) summary
      TIGR02169
      Location:98351
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    12. XM_030244538.2XP_030100398.1  centrosomal protein of 70 kDa isoform X2

      Conserved Domains (1) summary
      TIGR02169
      Location:57310
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    13. XM_006511393.2XP_006511456.1  centrosomal protein of 70 kDa isoform X4

    14. XM_006511391.4XP_006511454.1  centrosomal protein of 70 kDa isoform X3

      See identical proteins and their annotated locations for XP_006511454.1

    RNA

    1. XR_003947992.2 RNA Sequence

    2. XR_003947993.2 RNA Sequence

    3. XR_003947990.2 RNA Sequence

    4. XR_003947989.2 RNA Sequence

    5. XR_003947988.2 RNA Sequence

    6. XR_004935539.1 RNA Sequence

    7. XR_001779002.3 RNA Sequence

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