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    2700062C07Rik RIKEN cDNA 2700062C07 gene [ Mus musculus (house mouse) ]

    Gene ID: 68046, updated on 31-Jan-2019

    Summary

    Official Symbol
    2700062C07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2700062C07 geneprovided by MGI
    Primary source
    MGI:MGI:1915296
    See related
    Ensembl:ENSMUSG00000024273
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C87515; AI195775
    Expression
    Ubiquitous expression in CNS E18 (RPKM 9.8), CNS E14 (RPKM 9.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See 2700062C07Rik in Genome Data Viewer
    Location:
    18; 18 A2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (24470871..24477767)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (24629372..24636268)

    Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 32547 Neighboring gene microRNA 187 Neighboring gene predicted gene, 32436 Neighboring gene regulation of nuclear pre-mRNA domain containing 1A Neighboring gene solute carrier family 39 (metal ion transporter), member 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC103375

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    UPF0711 protein C18orf21 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026529.4NP_080805.1  UPF0711 protein C18orf21 homolog

      See identical proteins and their annotated locations for NP_080805.1

      Status: PREDICTED

      Source sequence(s)
      AC125096
      Consensus CDS
      CCDS29101.1
      UniProtKB/Swiss-Prot
      Q5XFZ0
      Related
      ENSMUSP00000095251.3, ENSMUST00000097646.4
      Conserved Domains (1) summary
      pfam15719
      Location:27217
      DUF4674; Domain of unknown function (DUF4674)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

      Range
      24470871..24477767
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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