Format

Send to:

Choose Destination
    • Showing Current items.

    Ooep oocyte expressed protein [ Mus musculus (house mouse) ]

    Gene ID: 67968, updated on 16-Oct-2021

    Summary

    Official Symbol
    Ooepprovided by MGI
    Official Full Name
    oocyte expressed proteinprovided by MGI
    Primary source
    MGI:MGI:1915218
    See related
    Ensembl:ENSMUSG00000032346
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sddr; Floped; Moep19; 2410146L05Rik
    Expression
    Biased expression in bladder adult (RPKM 8.3), ovary adult (RPKM 5.3) and 5 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ooep in Genome Data Viewer
    Location:
    9; 9 E1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (78284185..78285870, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (78376903..78378588, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (78224710..78226395, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated DppUp enhancer cluster Neighboring gene developmental pluripotency associated 5A Neighboring gene 60S ribosomal protein L9-like Neighboring gene DEAD box helicase 43

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables RNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cellular protein-containing complex assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within embryo implantation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in embryonic pattern specification IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within embryonic pattern specification IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in establishment of spindle localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in establishment or maintenance of apical/basal cell polarity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within establishment or maintenance of apical/basal cell polarity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within fertilization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within in utero embryonic development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of double-strand break repair IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of double-strand break repair via homologous recombination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of meiotic nuclear division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within protein phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of cell division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of establishment of protein localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of protein localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in replication fork processing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in apical cortex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in apical part of cell IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of protein-containing complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of subcortical maternal complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of subcortical maternal complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    oocyte-expressed protein homolog
    Names
    STAT3 downstream gene and differentiation regulator
    factor located in oocytes permitting embryonic development
    oocyte and embryo specific protein
    oocyte expressed protein homolog (dog)
    oocyte- and embryo-specific protein 19

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026480.3NP_080756.1  oocyte-expressed protein homolog

      See identical proteins and their annotated locations for NP_080756.1

      Status: VALIDATED

      Source sequence(s)
      AK010809, AK145510
      Consensus CDS
      CCDS23361.1
      UniProtKB/Swiss-Prot
      Q9CWE6
      Related
      ENSMUSP00000034900.8, ENSMUST00000034900.8
      Conserved Domains (1) summary
      cd12795
      Location:23128
      FILIA_N_like; FILIA-N KH-like domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      78284185..78285870 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center