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    Zcchc10 zinc finger, CCHC domain containing 10 [ Mus musculus (house mouse) ]

    Gene ID: 67966, updated on 23-Jun-2021

    Summary

    Official Symbol
    Zcchc10provided by MGI
    Official Full Name
    zinc finger, CCHC domain containing 10provided by MGI
    Primary source
    MGI:MGI:1196228
    See related
    Ensembl:ENSMUSG00000018239
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA675321; D11Ertd416; D11Ertd416e; 2410141K03Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 5.3), liver E14 (RPKM 5.0) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Zcchc10 in Genome Data Viewer
    Location:
    11 B1.3; 11 31.92 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (53215516..53224128)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (53324689..53333301)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (53138191..53146803)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene heat shock protein 4 Neighboring gene predicted gene, 30525 Neighboring gene AF4/FMR2 family, member 4 Neighboring gene predicted gene, 32048 Neighboring gene predicted gene, 25930

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    zinc finger CCHC domain-containing protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026479.4NP_080755.2  zinc finger CCHC domain-containing protein 10

      See identical proteins and their annotated locations for NP_080755.2

      Status: PROVISIONAL

      Source sequence(s)
      AL592489
      Consensus CDS
      CCDS24675.1
      UniProtKB/Swiss-Prot
      Q9CX48
      Related
      ENSMUSP00000018383.4, ENSMUST00000018383.10
      Conserved Domains (1) summary
      pfam13917
      Location:1756
      zf-CCHC_3; Zinc knuckle

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      53215516..53224128
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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