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    Camsap2 calmodulin regulated spectrin-associated protein family, member 2 [ Mus musculus (house mouse) ]

    Gene ID: 67886, updated on 31-Jan-2019

    Summary

    Official Symbol
    Camsap2provided by MGI
    Official Full Name
    calmodulin regulated spectrin-associated protein family, member 2provided by MGI
    Primary source
    MGI:MGI:1922434
    See related
    Ensembl:ENSMUSG00000041570
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Camsap1l1; mKIAA1078; 1600013L13Rik; 4930541M15Rik
    Expression
    Broad expression in CNS E18 (RPKM 12.4), whole brain E14.5 (RPKM 11.7) and 25 other tissues See more
    Orthologs

    Genomic context

    See Camsap2 in Genome Data Viewer
    Location:
    1; 1 E4
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (136268123..136346399, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (138164700..138242681, complement)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene innate immunity activator Neighboring gene predicted gene 3878 Neighboring gene G protein-coupled receptor 25 Neighboring gene RIKEN cDNA 9230116N13 gene Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 Neighboring gene kinesin family member 14 Neighboring gene predicted gene 29485

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule binding IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule minus-end binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    microtubule minus-end binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    spectrin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    axon development ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasmic microtubule organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    microtubule cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    microtubule cytoskeleton organization ISO
    Inferred from Sequence Orthology
    more info
     
    negative regulation of microtubule depolymerization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    neuron projection development IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of Golgi organization ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of dendrite development ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of microtubule polymerization ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of organelle organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    regulation of organelle organization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    colocalizes_with Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule end ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with microtubule minus-end IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    colocalizes_with microtubule minus-end IDA
    Inferred from Direct Assay
    more info
    PubMed 
    colocalizes_with microtubule minus-end ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    calmodulin-regulated spectrin-associated protein 2
    Names
    calmodulin-regulated spectrin-associated protein 1-like protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347109.1NP_001334038.1  calmodulin-regulated spectrin-associated protein 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC120875, AC124550
      Consensus CDS
      CCDS83598.1
      UniProtKB/TrEMBL
      A0A0A6YY67
    2. NM_001347110.1NP_001334039.1  calmodulin-regulated spectrin-associated protein 2 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC120875, AC124550
      Consensus CDS
      CCDS83597.1
      UniProtKB/Swiss-Prot
      Q8C1B1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      136268123..136346399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006529833.2XP_006529896.1  calmodulin-regulated spectrin-associated protein 2 isoform X2

      Related
      ENSMUSP00000142299.1, ENSMUST00000192314.1
      Conserved Domains (3) summary
      pfam08683
      Location:13331451
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam11971
      Location:237315
      CAMSAP_CH; CAMSAP CH domain
      pfam17095
      Location:739789
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
    2. XM_006529832.2XP_006529895.1  calmodulin-regulated spectrin-associated protein 2 isoform X1

      Conserved Domains (3) summary
      pfam08683
      Location:13421460
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam11971
      Location:237315
      CAMSAP_CH; CAMSAP CH domain
      pfam17095
      Location:739789
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
    3. XM_006529834.2XP_006529897.1  calmodulin-regulated spectrin-associated protein 2 isoform X3

      UniProtKB/Swiss-Prot
      Q8C1B1
      Conserved Domains (3) summary
      pfam08683
      Location:13311449
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam11971
      Location:226304
      CAMSAP_CH; CAMSAP CH domain
      pfam17095
      Location:728778
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
    4. XM_006529835.2XP_006529898.1  calmodulin-regulated spectrin-associated protein 2 isoform X4

      Related
      ENSMUSP00000142166.1, ENSMUST00000192001.5
      Conserved Domains (3) summary
      pfam08683
      Location:13221440
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam11971
      Location:226304
      CAMSAP_CH; CAMSAP CH domain
      pfam17095
      Location:728778
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
    5. XM_011248066.2XP_011246368.1  calmodulin-regulated spectrin-associated protein 2 isoform X5

      Conserved Domains (2) summary
      pfam08683
      Location:9401058
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam17095
      Location:337387
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001081360.1: Suppressed sequence

      Description
      NM_001081360.1: This RefSeq was removed because currently there is insufficient support for the transcript and protein.
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