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    Camsap2 calmodulin regulated spectrin-associated protein family, member 2 [ Mus musculus (house mouse) ]

    Gene ID: 67886, updated on 23-Jun-2021

    Summary

    Official Symbol
    Camsap2provided by MGI
    Official Full Name
    calmodulin regulated spectrin-associated protein family, member 2provided by MGI
    Primary source
    MGI:MGI:1922434
    See related
    Ensembl:ENSMUSG00000041570
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cams; Camsap1l1; mKIAA1078; 1600013L13Rik; 4930541M15Rik
    Expression
    Broad expression in CNS E18 (RPKM 12.4), whole brain E14.5 (RPKM 11.7) and 25 other tissues See more
    Orthologs
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    Genomic context

    See Camsap2 in Genome Data Viewer
    Location:
    1; 1 E4
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (136195861..136273855, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (136268123..136346117, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (138164700..138242681, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene innate immunity activator Neighboring gene predicted gene 3878 Neighboring gene G protein-coupled receptor 25 Neighboring gene RIKEN cDNA 9230116N13 gene Neighboring gene DEAD box helicase 59 Neighboring gene kinesin family member 14 Neighboring gene predicted gene 29485

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables microtubule minus-end binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables microtubule minus-end binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables microtubule minus-end binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables spectrin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in axon development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cytoplasmic microtubule organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in microtubule cytoskeleton organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of microtubule depolymerization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of Golgi organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of dendrite development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of microtubule polymerization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of organelle organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in regulation of organelle organization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    colocalizes_with Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ciliary basal body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microtubule cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in microtubule end ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with microtubule minus-end IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in microtubule minus-end IDA
    Inferred from Direct Assay
    more info
    PubMed 
    colocalizes_with microtubule minus-end ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    calmodulin-regulated spectrin-associated protein 2
    Names
    calmodulin-regulated spectrin-associated protein 1-like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347109.1NP_001334038.1  calmodulin-regulated spectrin-associated protein 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC120875, AC124550
      Consensus CDS
      CCDS83598.1
      UniProtKB/TrEMBL
      A0A0A6YY67
      Related
      ENSMUSP00000142299.2, ENSMUST00000192314.2
    2. NM_001347110.1NP_001334039.1  calmodulin-regulated spectrin-associated protein 2 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC120875, AC124550
      Consensus CDS
      CCDS83597.1
      UniProtKB/Swiss-Prot
      Q8C1B1
      Related
      ENSMUSP00000142166.2, ENSMUST00000192001.6

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      136195861..136273855 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006529832.3XP_006529895.1  calmodulin-regulated spectrin-associated protein 2 isoform X1

      Conserved Domains (4) summary
      PHA03247
      Location:9171028
      PHA03247; large tegument protein UL36; Provisional
      pfam11971
      Location:237315
      CAMSAP_CH; CAMSAP CH domain
      pfam08683
      Location:13421460
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam17095
      Location:731789
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
    2. XM_006529834.4XP_006529897.1  calmodulin-regulated spectrin-associated protein 2 isoform X2

      UniProtKB/Swiss-Prot
      Q8C1B1
      Conserved Domains (4) summary
      PHA03247
      Location:9061017
      PHA03247; large tegument protein UL36; Provisional
      pfam11971
      Location:226304
      CAMSAP_CH; CAMSAP CH domain
      pfam08683
      Location:13311449
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam17095
      Location:720778
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
    3. XM_011248066.4XP_011246368.1  calmodulin-regulated spectrin-associated protein 2 isoform X4

      Conserved Domains (3) summary
      PHA03247
      Location:515626
      PHA03247; large tegument protein UL36; Provisional
      pfam08683
      Location:9401058
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam17095
      Location:329387
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin
    4. XM_036153216.1XP_036009109.1  calmodulin-regulated spectrin-associated protein 2 isoform X3

      Conserved Domains (3) summary
      PHA03247
      Location:9171028
      PHA03247; large tegument protein UL36; Provisional
      pfam11971
      Location:237315
      CAMSAP_CH; CAMSAP CH domain
      pfam17095
      Location:731789
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin

    RNA

    1. XR_004934125.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001081360.1: Suppressed sequence

      Description
      NM_001081360.1: This RefSeq was removed because currently there is insufficient support for the transcript and protein.
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