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    Coq10b coenzyme Q10B [ Mus musculus (house mouse) ]

    Gene ID: 67876, updated on 23-May-2018

    Summary

    Official Symbol
    Coq10bprovided by MGI
    Official Full Name
    coenzyme Q10Bprovided by MGI
    Primary source
    MGI:MGI:1915126
    See related
    Ensembl:ENSMUSG00000025981 Vega:OTTMUSG00000046967
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AV002237; AW742641; 1500041J02Rik; 1700030I21Rik; 9530077A17Rik
    Expression
    Ubiquitous expression in bladder adult (RPKM 24.6), adrenal adult (RPKM 11.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Coq10b in Genome Data Viewer
    Location:
    1; 1 C1.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (55052770..55072702)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (55109614..55129546)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930444A19 gene Neighboring gene ankyrin repeat domain 44 Neighboring gene splicing factor 3b, subunit 1 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene heat shock protein 1 (chaperonin) Neighboring gene heat shock protein 1 (chaperonin 10) Neighboring gene ribosomal protein L7A pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ubiquinone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    cellular respiration IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ubiquinone biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion HDA PubMed 
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    coenzyme Q-binding protein COQ10 homolog B, mitochondrial
    Names
    coenzyme Q10 homolog B

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039710.1NP_001034799.1  coenzyme Q-binding protein COQ10 homolog B, mitochondrial isoform 1

      See identical proteins and their annotated locations for NP_001034799.1

      Status: VALIDATED

      Source sequence(s)
      AI462376, AK015454, AK168837
      Consensus CDS
      CCDS35568.1
      UniProtKB/Swiss-Prot
      Q3THF9
      UniProtKB/TrEMBL
      A0A0R4J066
      Related
      ENSMUSP00000027125.5, OTTMUSP00000066986, ENSMUST00000027125.6, OTTMUST00000121715
      Conserved Domains (1) summary
      cd07813
      Location:82220
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins
    2. NM_026424.3NP_080700.3  coenzyme Q-binding protein COQ10 homolog B, mitochondrial isoform 2

      See identical proteins and their annotated locations for NP_080700.3

      Status: VALIDATED

      Source sequence(s)
      AI462376, AK006551, AK015454, AK168837
      Consensus CDS
      CCDS14959.1
      UniProtKB/Swiss-Prot
      Q3THF9
      UniProtKB/TrEMBL
      G5E8J7
      Related
      ENSMUSP00000084899.4, OTTMUSP00000066985, ENSMUST00000087617.10, OTTMUST00000121714
      Conserved Domains (1) summary
      cd07813
      Location:36170
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      55052770..55072702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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